Alex Chklovski
@achklovski
PhD Candidate at the Centre for Microbiome Research, Brisbane
ID: 1547028581259194368
13-07-2022 01:22:28
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Metagenome taxonomy profilers usually ignore unknown species. SingleM is an accurate profiler which doesn't, even detecting phyla with no MAGs. We applied it to 250,000 metagenomes- in environmental samples 75% lack a genome/MAG (abundance-weighted). A 🧵biorxiv.org/content/10.110…
