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Toward improved image‐based root phenotyping: Handling temporal and cross‐site domain shifts in crop root segmentation models - Banet - 2024 - The Plant Phenome Journal acsess.onlinelibrary.wiley.com/doi/10.1002/pp… - I really enjoyed this collaboration and am happy to see this published.

I am hiring a postdoctoral researcher with my colleague Dr. Chen at ORNL to work on shoot and root responses to fungal and bacterial partners in Populus trees. Physiology, microbes, and image-based phenotyping all a plus. Check out the ad and please share! jobs.ornl.gov/Exempt/job/Oak…

An exciting PhD opportunity at the Department of Agroecology - Aarhus University on N2O emission and crop residue! Department of Agroecology phd.tech.au.dk/for-applicants…

📢PhD opportunities in Ecological Data Science as part of *Leverhulme DTP* On offer: fully funded deep-learning PhD project working with exciting long-term deep-sea acoustic and image datasets!🪸🐟📸🎤👩‍💻 👉More info here: ecological-data-science.github.io/projects.html #DeepSea #MachineLearning

Final days to apply to the Ecological Data Science Leverhulme DTP which offers an exciting array of data science and machine learning projects! More info here: ecological-data-science.github.io/projects.html Deadline: 5pm (GMT) on the 22nd March 2024. Tiffany Vlaar Abraham George Smith EcologicalDataSci

if you're looking for a PhD and are interested in #roots, #belowground dynamics, and links between plant physiology, soils and biogeochemistry, or using AI to help sample all the above, get in touch. I am definately recruiting at least one funded student this year, maybe more...

🚨New paper alert!🚨 Our work demonstrating the suitability of RootPainter, an interactive machine learning tool, to marine image analysis is now out in The Royal Society Open Science (1/3): royalsocietypublishing.org/doi/10.1098/rs…

Be sure to check out the paper and our handy handbook (zenodo.org/records/100132…) to see just how accessible RootPainter is, even for users without machine learning experience Huge thanks to my collaborators Abraham George Smith Daniel McKay Fletcher Ann Larsson Marine Biodiscovery Centre, UoA and Laurence De Clippele ! (3/3)

How do you boost AI model training efficiency? A team of Benthic Ecologists and Machine Learning Scientists dived into this at the Marine Animal Forest of the World training school! More on this topic coming soon ….! #AI #RootPainter #iML #BenthicEcology

PhD position in Data-driven plant phenotyping for discovering novel perennial traits with Eusun Han phd.tech.au.dk/for-applicants…

📢📢full funded (EU-UK) PhD project with me School of Natural Sciences, Trinity College Dublin doing cutting edge stuff with automated root measurements to understand ecosystem greenhouse gas fluxes: findaphd.com/phds/project/r… #roots #phdposition #rootecology

📢New Root paper: Accesible AI model for ecologists fails to catch roots in complex mature forest soil images from minirhizotrons 😭. More collaborative work needed! tiny.cc/0yhozz lead by Grace Handy w Abraham George Smith Daniela Yaffar @nanimuelbert iEES Paris BIFoR

New paper 📊🌱: 'Automated seminal root angle measurement with corrective annotation' academic.oup.com/aobpla/article… Excited to share our new free #OpenSource tool for root scientists! With Marta Malinowska, Torben Asp, & team QGG AU #AI #OpenScience #ROOTS

🎓🐟 PhD Opportunity! 🐟🎓 Explore how coastal habitats support fisheries using #bioacoustics & #MachineLearning! 🌊 Study marine ecosystems 🌐 Develop AI tools 💡 Drive sustainability 📍 University of Glasgow 📆 Apply by 3 January 🔗 shorturl.at/4qt5K

There's a science party on Bluesky. Join us.

Five seasons with DeepRootLab: A unique facility for easier deep root research in the field biorxiv.org/content/10.110… -- I really enjoyed this collaboration with Eusun Han et al - more work coming soon.