Agnieszka Golicz (@agnieszkagolicz) 's Twitter Profile
Agnieszka Golicz

@agnieszkagolicz

Professor of Agrobioinformatics at Justus Liebig University

ID: 2452017380

linkhttps://goliczgenomelab.com/ calendar_today18-04-2014 22:40:32

2,2K Tweet

524 Followers

635 Following

Javier Santoyo (@jsantoyo) 's Twitter Profile Photo

Predicting gene expression from DNA sequence using deep learning models. #GeneExpression #DNAsequencing #DeepLearning Nature Reviews Genetics nature.com/articles/s4157…

Predicting gene expression from DNA sequence using deep learning models. #GeneExpression #DNAsequencing #DeepLearning <a href="/NatureRevGenet/">Nature Reviews Genetics</a> 
nature.com/articles/s4157…
Stephen Turner 🦋 @stephenturner.us (@strnr) 's Twitter Profile Photo

SVbyEye: A visual tool to characterize structural variation among whole-genome assemblies academic.oup.com/bioinformatics… 🧬🖥️🧪 github.com/daewoooo/SVbyE…

SVbyEye: A visual tool to characterize structural variation among whole-genome assemblies academic.oup.com/bioinformatics… 🧬🖥️🧪 github.com/daewoooo/SVbyE…
nature (@nature) 's Twitter Profile Photo

Nature research paper: Impacts of climate change on global agriculture accounting for adaptation go.nature.com/3TxaXKy

Javier Santoyo (@jsantoyo) 's Twitter Profile Photo

Mumemto: efficient maximal matching across pangenomes. #Pangenomes #VisualizationTool #PangenomeDiagnostic #Bioinformatics #Genomics Genome Biology genomebiology.biomedcentral.com/articles/10.11…

Mumemto: efficient maximal matching across pangenomes. #Pangenomes #VisualizationTool #PangenomeDiagnostic #Bioinformatics #Genomics <a href="/GenomeBiology/">Genome Biology</a>
genomebiology.biomedcentral.com/articles/10.11…
Javier Santoyo (@jsantoyo) 's Twitter Profile Photo

PanVA: a visual analytics tool for pangenomic variant analysis. #Pangenomes #VariantAnalysis #DataVisualization #Genomics #Bioinformatics bioRxiv Bioinfo biorxiv.org/content/10.110…

PanVA: a visual analytics tool for pangenomic variant analysis. #Pangenomes #VariantAnalysis #DataVisualization #Genomics #Bioinformatics <a href="/biorxiv_bioinfo/">bioRxiv Bioinfo</a> 
biorxiv.org/content/10.110…
Tatsuya Nobori (@nobolly) 's Twitter Profile Photo

Recessive epistasis of a synonymous mutation confers cucumber domestication through epitranscriptomic regulation cell.com/cell/fulltext/…

Iris Marchal (@iris_march_) 's Twitter Profile Photo

Gene regulatory networks are crucial for understanding complex gene regulation in plants and could help improve crops for more sustainable and climate-resilient agriculture. Read about it in this Review out now in Nature Biotechnology nature.com/articles/s4158…

Dr. Muhammad Tahir ul Qamar (@tahir_ul_qamar) 's Twitter Profile Photo

I am excited to share #PangenePro, our open-source pipeline for rapid gene family analysis at the pangenome level, which has been published in Bioinformatics Advances. Read more: academic.oup.com/bioadv/article…

I am excited to share #PangenePro, our open-source pipeline for rapid gene family analysis at the pangenome level, which has been published in Bioinformatics Advances.
Read more: academic.oup.com/bioadv/article…
AGRI Committee Press (@ep_agriculture) 's Twitter Profile Photo

🔴AGRI Committee Press starts in 30 minutes to vote on the report: The future of agriculture and the post-2027 common agricultural policy Follow live: bit.ly/44ijesb europarl.europa.eu/committees/en/…

Javier Santoyo (@jsantoyo) 's Twitter Profile Photo

Agptools: a utility suite for editing genome assemblies. #GenomeAssembly #AssemblyEditing #AGPfiles #Genomics #Bioinformatics academic.oup.com/bioinformatics…

Agptools: a utility suite for editing genome assemblies. #GenomeAssembly #AssemblyEditing #AGPfiles #Genomics #Bioinformatics 
academic.oup.com/bioinformatics…
Keyon Vafa (@keyonv) 's Twitter Profile Photo

Can an AI model predict perfectly and still have a terrible world model? What would that even mean? Our new ICML paper formalizes these questions One result tells the story: A transformer trained on 10M solar systems nails planetary orbits. But it botches gravitational laws 🧵

New Phytologist (@newphyt) 's Twitter Profile Photo

Enhancing stress tolerance in plants via cis-regulatory element modification using gene targeting Ke et al. 📖 nph.onlinelibrary.wiley.com/share/YM4WH3CI…

Enhancing stress tolerance in plants via cis-regulatory element modification using gene targeting

Ke et al.

📖 nph.onlinelibrary.wiley.com/share/YM4WH3CI…
Jingyi Jessica Li (李婧翌) (@jsb_ucla) 's Twitter Profile Photo

Excited to share our new method ClipperQTL published in Genome Biology Built on our p-value-free FDR control framework Clipper, ClipperQTL performs on par with FastQTL and runs up to 500× faster. Big thanks to my former PhD student Heather Zhou! genomebiology.biomedcentral.com/articles/10.11… #eQTL

antisense. (@razoralign) 's Twitter Profile Photo

SVPG: A pangenome-based structural variant detection approach and rapid augmentation of pangenome graphs with new samples biorxiv.org/content/10.110…

SVPG: A pangenome-based structural variant detection approach and rapid augmentation of pangenome graphs with new samples biorxiv.org/content/10.110…
Prof. Nikolai Slavov (@slavov_n) 's Twitter Profile Photo

Data leakage is a common problem in AI. It is analogous to ‘teaching to the test’ and leads to overestimation of model capabilities. This article reports that leakage affected 294 papers across 17 scientific fields.

Data leakage is a common problem in AI.

It is analogous to ‘teaching to the test’ and leads to overestimation of model capabilities.

This article reports that leakage affected 294 papers across 17 scientific fields.
Zeyun Lu 鲁泽沄 (@zeyun_lu) 's Twitter Profile Photo

Happy to share that our work from the Nicholas Mancuso lab is out in Nature Genetics! We developed SuShiE, a multiancestry fine-mapping method for molecular traits. doi.org/10.1038/s41588…