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Found one of the first #tSNE maps we ever made of #singlecell human data (pancreas, early 2014 in this case) at the Alexander van Oudenaarden lab with Dominic Grün's RaceID! Back when single cell datasets were small enough to carefully look at each cell individually :)

Congratulations Susanne vd Brink for an outstanding PhD defence today. I learned so much from you during your time in the lab. Thank you for bringing #gastruloids to our lab and all the best in Barcelona!

Excited to share our preprints on single-cell chromatin profiling. sortChIC (biorxiv.org/content/10.110…) to profile active and repressive histone modifications during blood formation. scChIX (biorxiv.org/content/10.110…) to map multiple histone modifications in the same single cells.

We are very excited to share our work in nature on developing scRibo-seq, a method for #singlecell ribosome profiling! With Jeroen van den Berg, Amanda Andersson-Rolf, Hans Clevers, and Alexander van Oudenaarden nature.com/articles/s4158… 1/15

Our work on single-cell ribosome profiling is out! Huge congrats to Michael VanInsberghe who was brave enough to embark on this pretty crazy experiment that turned out to work beautifully. Thank you Jeroen van den Berg, Amanda Andersson-Rolf and Hans Clevers. Check it out: nature.com/articles/s4158…

VASA-seq: a wonderful collaboration with labs that generously contributed their expertise in microfluidics Hollfelder Lab, splicing Martin Hemberg and dev bio Alfonso Martinez Arias & Jennifer Nichols. 🙏Fredrik Salmen Joachim De Jonghe Anna Alemany Guillermo Parada Tomasz Kaminski for the heavy 🏋️‍♀️🏋️‍♂️⤵️

Our institute, the Hubrecht, is recruiting junior (tenure-track) and senior (tenured) group leaders. Fantastic scientific environment, very good (financial) support and a great place to live (Utrecht). Please retweet and apply! eur02.safelinks.protection.outlook.com/?url=https%3A%…

The Single-Cell Core has a vacancy for a technician! Are you into single-cell (epi)genomics, curious by nature and excited to optimize our technologies to bring our facility to the next level? Let us know! More info on how to apply? Check the link below: hubrecht.eu/job/technician…

At the Hubrecht Institute Institute we are looking for a new director with Alexander van Oudenaarden slowly reaching the 10th year of his turn. Please RT and forward … or apply directly! academictransfer.com/en/306918/dire…

The Hubrecht Insitute is looking for a new director! The vacancy is open until 1 March. Find all the information about this great opportunity and how to apply here: academictransfer.com/en/306918/dire…

High-throughput total RNA sequencing in single cells using VASA-seq go.nature.com/3u2ONDS

At the Hubrecht Institute, we are establishing the Hubrecht Talent Program to support underrepresented groups of students within the Netherlands. The first round of BSc students is recruited this year, deadline October 27th. Please spread. For further details see: hubrecht.eu/about-us/hubre…

We are recruiting group leaders at the Hubrecht Institute! Any topic welcome. A fantastic research environment, excellent financial support, very good students, no teaching requirement, great facilities and a very supportive and flat organization. Pls RT hubrecht.eu/job/group-lead…

Register now! Registration and abstract submission now open until 14 March for EMBO Workshop on Systems biology: Linking chromatin and epigenetics to disease and development, 25 – 28 May 2023 in Alexandroupoli, Greece meetings.embo.org/event/23-sys-b… #EMBOsysBio23

Exhilarated to share our pre-print describing a novel method, scEdU-seq, to measure DNA replication forks and their speeds in singe cells. Many thanks to Alexander van Oudenaarden, @Bvincentv and others Hubrecht Institute for making it happen! biorxiv.org/content/10.110…

The lab of Alexander van Oudenaarden developed two new methods to study chromatin in single cells. Researchers can use these methods, published in Nature Biotechnology and Nature Genetics, to increase our understanding of chromatin regulation during development. hubrecht.eu/new-methods-fo…

Happy to see the published version of scChIX-seq: a framework to learn dynamic relationships between histone marks in single cells. nature.com/articles/s4158…

Save the date! Single Cell Genomics 2023 #SCG2023 takes place Oct. 9-11 2023 in the beautiful mountain town Engelberg in Switzerland! 10th year anniversary of this unique experience. IdoAmitLab, Sten Linnarsson, Alexander van Oudenaarden, MarioniLab, Rickard Sandberg, Aviv Regev, Amos Tanay

Single cell enthusiasts, get your flip-flops ready! Less than 24 hours until the registration to SCG2024 in Corinthia, Greece opens (April 3rd 3PM EU time) conferences.weizmann.ac.il/SCG2024/  Space is limited, don’t miss your spot!

Very happy our scEdU-seq manuscript is published in Nature Methods! Big shoutout to vincentvB, Alexander van Oudenaarden @marcelvanvugt, Sergio Perez Acebron and Anchel de Jaime-Soguero for their contribution to the final product! For those interested here is the link to the paper rdcu.be/dK2hL