Asad Prodhan (@asad_prodhan) 's Twitter Profile
Asad Prodhan

@asad_prodhan

Laboratory Scientist & Adjunct Senior Lecturer | AgTech, Genomics & Bioinformatics for Crop Health & Biosecurity | @DPIRDWA @uwanews | Views are my own

ID: 3244021046

linkhttps://github.com/asadprodhan?tab=repositories calendar_today13-06-2015 08:09:56

63 Tweet

157 Followers

140 Following

Rhys White 🧬 (@rhystwhite) 's Twitter Profile Photo

Kicking off #MicroSeq2023 session 1.1 is plenary speaker Monica Kehoe (@DPIRDWA), who will dive into the world of high-throughput sequencing, showcasing its pivotal role in driving innovation for cutting-edge diagnostic development 🧬🔬 #Genomics #ScienceAdvances #scicomm

Kicking off #MicroSeq2023 session 1.1 is plenary speaker <a href="/monica_kehoe/">Monica Kehoe</a> (@DPIRDWA), who will dive into the world of high-throughput sequencing, showcasing its pivotal role in driving innovation for cutting-edge diagnostic development 🧬🔬 #Genomics #ScienceAdvances #scicomm
MicroSeq2024 (@microseq_asm) 's Twitter Profile Photo

Next up at #MicroSeq2023 is @StevenJRobbins From the Australian Centre for Ecogenomics @ace_uq, School of Chemistry and Molecular Biosciences UQ Chemistry and Molecular Biosciences He'll be talking about making the most of marine metagenomes beyond prokaryotic MAGs using @Nanopore sequencing. Australian Institute of Marine Science

Next up at #MicroSeq2023 is @StevenJRobbins From the Australian Centre for Ecogenomics @ace_uq, School of Chemistry and Molecular Biosciences <a href="/UQ_SCMB/">UQ Chemistry and Molecular Biosciences</a> He'll be talking about making the most of marine metagenomes beyond prokaryotic MAGs using @Nanopore sequencing. <a href="/aims_gov_au/">Australian Institute of Marine Science</a>
MicroSeq2024 (@microseq_asm) 's Twitter Profile Photo

One of the many #Salmonella serovars is Salmonella Virchow. Through analysis of 413 genomes, 2nd year Ph.D. student Samriddhi Thakur shows multiple lineages, STs, pathogenicity islands, and virulence factors. Few AMR mechanisms. #MicroSeq2023

One of the many #Salmonella serovars is Salmonella Virchow. Through analysis of 413 genomes, 2nd year Ph.D. student <a href="/SamThakur95/">Samriddhi Thakur</a> shows multiple lineages, STs, pathogenicity islands, and virulence factors. Few AMR mechanisms. #MicroSeq2023
MicroSeq2024 (@microseq_asm) 's Twitter Profile Photo

The human gut #archaeome remains largely under-explored. Myo Thet Naung consistently identified three main archaeal phyla dominated by Methanobacteriota, and keen to understand the role of archaea in gut health and disease #MicroSeq2023

The human gut #archaeome remains largely under-explored. <a href="/MyoThetNaung/">Myo Thet Naung</a> consistently identified three main archaeal phyla dominated by Methanobacteriota, and keen to understand the role of archaea in gut health and disease #MicroSeq2023
Asad Prodhan (@asad_prodhan) 's Twitter Profile Photo

Super excited to share our new Plant Biosecurity Bioinformatics pipeline, sangerFlow! biorxiv.org/content/10.110… sangerFlow automates the analysis of the diagnostic PCR Sanger sequencing data and produces a species ID leveraging Nextflow and Singularity containers

Super excited to share our new Plant Biosecurity Bioinformatics pipeline, sangerFlow! biorxiv.org/content/10.110…
sangerFlow automates the analysis of the diagnostic PCR Sanger sequencing data and produces a species ID leveraging Nextflow and Singularity containers
Asad Prodhan (@asad_prodhan) 's Twitter Profile Photo

Can we improve bacterial genome assemblies from old Nanopore runs by re-basecalling with Dorado? My benchmarking study showed that Dorado improved read quality from old runs leading to more complete genome assemblies github.com/asadprodhan/Do… Oxford Nanopore

Can we improve bacterial genome assemblies from old Nanopore runs by re-basecalling with Dorado?

My benchmarking study showed that Dorado improved read quality from old runs leading to more complete genome assemblies

github.com/asadprodhan/Do…

<a href="/nanopore/">Oxford Nanopore</a>
Monica Kehoe (@monica_kehoe) 's Twitter Profile Photo

Happy to be back at West Coast Microbiome this year, even happier to see Asad Prodhan presenting his work on improving bacterial genome assembly by re-basecalling with improved algorithms. Some really useful stuff and great result :)

Happy to be back at <a href="/WCmicrobiome/">West Coast Microbiome</a> this year, even happier to see <a href="/Asad_Prodhan/">Asad Prodhan</a> presenting his work on improving bacterial genome assembly by re-basecalling with improved algorithms. Some really useful stuff and great result :)
MicroSeq2024 (@microseq_asm) 's Twitter Profile Photo

Thanks to the speakers of #MicroSeq2024 session 2.1, join us at 11:35 AEST for an exciting line-up in session 2.2! We’ll hear from Xinyuan Zhu Munazzah Maqbool Asad Prodhan Micheal Leitner, Imadh Azeez and Josh Zhang. Chaired by George Bouras and Mozammel Hoque

MicroSeq2024 (@microseq_asm) 's Twitter Profile Photo

🧬 Excited to hear Asad Prodhan demonstrate how High-Throughput Sequencing improves MALDI-TOF MS accuracy for diagnosing plant pathogenic bacteria! Learn about faster, cheaper, and more accurate diagnostics. #MicroSeq2024 #MicrobialSequencing

🧬 Excited to hear <a href="/Asad_Prodhan/">Asad Prodhan</a> demonstrate how High-Throughput Sequencing improves MALDI-TOF MS accuracy for diagnosing plant pathogenic bacteria! Learn about faster, cheaper, and more accurate diagnostics. #MicroSeq2024 #MicrobialSequencing
Viet-Cuong Han (@cuongvhan) 's Twitter Profile Photo

Sequencing of a #cassava leaf with mosaic-like symptoms found in a garden in Darwin identified Sri Lankan cassava mosaic virus (#SLCMV) as the causative agent. First record of SLCMV in #Australia by DAFF team (ACT), Monica Kehoe Asad Prodhan. Vala et al. APDN (2024) 19:23

Sequencing of a #cassava leaf with mosaic-like symptoms found in a garden in Darwin identified Sri Lankan cassava mosaic virus (#SLCMV) as the causative agent. First record of SLCMV in #Australia by DAFF team (ACT), <a href="/monica_kehoe/">Monica Kehoe</a> <a href="/Asad_Prodhan/">Asad Prodhan</a>. Vala et al. APDN (2024) 19:23
Ben Congdon (@bcong11) 's Twitter Profile Photo

Soybean dwarf virus causes a leaf reddening disease in sub-clover. In the south-west of WA we have the YP strain which is transmitted primarily by the pea aphid and also green peach aphid. Meat & Livestock Australia DPIRD Broadacre - WA Grains & Livestock GRDC West See our latest article - shorturl.at/5TSGr

Soybean dwarf virus causes a leaf reddening disease in sub-clover. In the south-west of WA we have the YP strain which is transmitted primarily by the pea aphid and also green peach aphid. <a href="/meatlivestock/">Meat & Livestock Australia</a> <a href="/DPIRDbroadacre/">DPIRD Broadacre - WA Grains & Livestock</a> <a href="/GRDCWest/">GRDC West</a>  See our latest article - shorturl.at/5TSGr
Asad Prodhan (@asad_prodhan) 's Twitter Profile Photo

The atmosphere at the University of Melbourne is inspiring! Day 1 of BioInfoSummer 2024 BioInfoSummer 2024, a bioinformatics conference organized by the Australian Mathematical Sciences Institute Australian Mathematical Sciences Institute (AMSI) has kicked off today with engaging sessions and hands on workshops.

The atmosphere at the <a href="/UniMelb/">University of Melbourne</a> is inspiring!
Day 1 of BioInfoSummer 2024 <a href="/Bioinfosummer/">BioInfoSummer 2024</a>, a bioinformatics conference organized by the Australian Mathematical Sciences Institute <a href="/DiscoverAMSI/">Australian Mathematical Sciences Institute (AMSI)</a> has kicked off today with engaging sessions and hands on workshops.
Asad Prodhan (@asad_prodhan) 's Twitter Profile Photo

Day 1 | GRDC Conference, Perth, Australia 🌾 An incredible annual event where researchers, industry leaders, and growers come together to shape the future of grains research #GRDCUpdates! Visit @DPIRDWA Booth

Day 1 | <a href="/theGRDC/">GRDC</a> Conference, Perth, Australia 🌾
An incredible annual event where researchers, industry leaders, and growers come together to shape the future of grains research #GRDCUpdates! Visit @DPIRDWA Booth
MicroSeq2024 (@microseq_asm) 's Twitter Profile Photo

📣Calling Australian/NZ ECRs and PhD Students 📣 Abstract submission and registration for MicroSeq2025 opens July 21! Abstracts for both medium-length and lightning talks will be welcome.

📣Calling Australian/NZ ECRs and PhD Students 📣 Abstract submission and registration for MicroSeq2025 opens July 21! Abstracts for both medium-length and lightning talks will be welcome.
MicroSeq2024 (@microseq_asm) 's Twitter Profile Photo

🚨Abstract submission & registration for #MicroSeq2025 is OPEN! 🚨Get in quick! The first 50 registrations are FREE for PhD students and ECRs who are current ASM members, thanks to ASM. Head to our website to register now 👇 microseqconference.com/registration-a…

🚨Abstract submission &amp; registration for #MicroSeq2025 is OPEN! 🚨Get in quick! The first 50 registrations are FREE for PhD students and ECRs who are current ASM members, thanks to <a href="/AUSSOCMIC/">ASM</a>.

Head to our website to register now 👇
microseqconference.com/registration-a…
MicroSeq2024 (@microseq_asm) 's Twitter Profile Photo

You’re in luck! 🎉 The deadline for #MicroSeq2025 abstract submission has been EXTENDED by one week! New deadline: ✨11:59pm, Friday August 15, 2025✨ Don’t miss out! Register right here to submit your abstract 👇 trybooking.com/events/landing…

You’re in luck! 🎉 The deadline for #MicroSeq2025 abstract submission has been EXTENDED by one week! New deadline: ✨11:59pm, Friday August 15, 2025✨ Don’t miss out!

Register right here to submit your abstract 👇
trybooking.com/events/landing…