Austin A Varela (@austinavarela) 's Twitter Profile
Austin A Varela

@austinavarela

@cbm_student Tri-I CBM PhD Student interested in single-cell modeling | Researcher with @LaughneyLab and @CalebLareau | @NSF GRFP Fellow | NYC Born & Raised

ID: 1635752030424686592

linkhttps://austinv11.com calendar_today14-03-2023 21:17:38

12 Tweet

52 Followers

253 Following

Jackson Weir (@jacksonweir4) 's Twitter Profile Photo

Introducing Slide-tags: our new technology for truly single-cell, multi-modal spatial genomics! Had a blast working alongside Andy Russell, Naeem Nadaf, Evan Macosko, Fei Chen Lab, and the rest of our team on this project! biorxiv.org/content/10.110… 1/9

Jeremy Bernstein (@jxbz) 's Twitter Profile Photo

We are thrilled to announce "automatic gradient descent"---a neural network optimiser without hyperparameters. AGD trains out-of-the-box and at ImageNet scale. paper: arxiv.org/abs/2304.05187 PyTorch: github.com/jxbz/agd 1/5

Ahmed Mahfouz (@ahmedelkoussy) 's Twitter Profile Photo

If you are interested in representation and modelling of single-cell RNA-seq data, check our recent piece by Gerard-Bouland on binary representation. genomebiology.biomedcentral.com/articles/10.11… We show that many common analysis steps can be done on binarized data with little differences to counts

Samuel Bakhoum (@samuel_bakhoum) 's Twitter Profile Photo

1/ Our joint paper with the @LaughneyLabidentifying how #Chromosomal_Instability and #STING signaling cooperate with the immune system to drive #cancer #metastasis is out in @nature nature.com/articles/s4158…

Ashley Laughney (@laughneylab) 's Twitter Profile Photo

1/ Thrilled to share #ContactTracing – our new method to interrogate cell-cell interactions and their biological effects from #scRNAseq data published today in @nature nature.com/articles/s4158…

Memorial Sloan Kettering Cancer Center (@mskcancercenter) 's Twitter Profile Photo

A new study in nature from MSK and Weill Cornell Medicine shows that when a key immune pathway that normally defends the body against viruses and #cancer is persistently activated, it can actually dampen immune response and help cancer to spread. mskcc.org/news/new-resea…

CZI Science (@cziscience) 's Twitter Profile Photo

We’re thrilled to share that we’re launching a new @CZBiohub in New York! Bringing together engineers + scientists at Columbia University, Rockefeller University and Yale University, #CZBiohubNY will engineer immune cells for earlier detection & treatment of disease

Saez-Rodriguez Group (@saezlab) 's Twitter Profile Photo

📢 Our paper on MetalinksDB, a comprehensive metabolite-mediated cell-cell communication database, is now published in @BriefingBioinfo doi.org/10.1093/bib/bb…

📢 Our paper on MetalinksDB, a comprehensive metabolite-mediated cell-cell communication database, is now published in @BriefingBioinfo doi.org/10.1093/bib/bb…
Karthik Guruvayurappan (@somet3000) 's Twitter Profile Photo

Happy to share that the paper on enhancer interactions led by Jessica Zhou and I from my time in the Graham McVicker lab is now published in Cell Genomics! cell.com/cell-genomics/… A thread on some of the new analyses below: (1/n)