Center for Integrative Biodiversity Discovery (@cibd_mfnberlin) 's Twitter Profile
Center for Integrative Biodiversity Discovery

@cibd_mfnberlin

Increasing efficiency at discovering and exploring global biodiversity | Training next-gen taxonomists | We are housed at @mfnberlin #TaxonOMICS

ID: 1217076815480721409

linkhttp://bit.ly/biodiversity-discovery calendar_today14-01-2020 13:32:37

60 Tweet

239 Followers

59 Following

Rudolf Meier @rudolf-meier.bsky.soci (@rudolfmeier15) 's Twitter Profile Photo

In defense of flies! Some of us know that no defense is needed, but for everyone else, Emily Hartop from MfN Berlin and Erica McAlister from NHM London set the record straight. Dr Erica McAlister; @mfnberlin; Center for Integrative Biodiversity Discovery vox.com/down-to-earth/โ€ฆ

Rudolf Meier @rudolf-meier.bsky.soci (@rudolfmeier15) 's Twitter Profile Photo

ONTbarcoder 2.0: Real-time DNA barcoding with MinIONยดs R10.4. Now you can find out what species are in your sample, while you are still sequencing. Get more and better barcodes faster than ever. biorxiv.org/content/10.110โ€ฆ

Rudolf Meier @rudolf-meier.bsky.soci (@rudolfmeier15) 's Twitter Profile Photo

Dark Taxonomy II: From unknown to ready for biomonitoring in 5 steps. More on why describing 120 species of fungus gnats really matters. Bees, butterflies and birds, make room for your new friends tinyurl.com/42862af3 Florian Leese Roderic Page Donat Agosti Caterino Arthropod Biodiversity Lab @LawlessKahlil

Rudolf Meier @rudolf-meier.bsky.soci (@rudolfmeier15) 's Twitter Profile Photo

Introducing the Entomoscope! ๐ŸฆŸ๐Ÿ”ฌ DIY microscope for getting detailed images of tiny insects in ethanol. Do this: 1๏ธโƒฃ 3D-print the case 2๏ธโƒฃ Order parts online 3๏ธโƒฃ Assemble 4๏ธโƒฃ Begin imaging! ๐Ÿ“ธPerfect for entomologists keen on training AI! tinyurl.com/bdh86krz #DIYMicroscopy๐Ÿœ

Rudolf Meier @rudolf-meier.bsky.soci (@rudolfmeier15) 's Twitter Profile Photo

Out now: Real-time DNA barcoding with MinION! DNA barcoding isn't only for fancy labs - you can now discover global biodiversity in your kitchen while frying an egg (almost)! Reminds us of Dorothy Parkerยดs "Creativity is a wild mind and a disciplined eye" tinyurl.com/2fx5pzak

Rudolf Meier @rudolf-meier.bsky.soci (@rudolfmeier15) 's Twitter Profile Photo

Now published: DIY microscope๐Ÿ”ฌ for insects of all sizes, even those preserved in ethanol! Designed for developing holistic biomonitoring with AI tools. Most animal species and much of animal biomass are arthropods. They need frugal identification methods! ieeexplore.ieee.org/document/10401โ€ฆ

Rudolf Meier @rudolf-meier.bsky.soci (@rudolfmeier15) 's Twitter Profile Photo

Congrats to PhD student Lorenz Wรผhrl for publishing one of the Top Cited Paper in Mol. Ecol. Res. for 2022-23. He developed the DiversityScanner for sorting and imaging insects. See the robot in action here: youtu.be/ElJ5VSHa4OI. Download publication: onlinelibrary.wiley.com/doi/full/10.11โ€ฆ

Congrats to PhD student Lorenz Wรผhrl for publishing one of the Top Cited Paper in Mol. Ecol. Res. for 2022-23. He developed the DiversityScanner for sorting and imaging insects. See the robot in action here: youtu.be/ElJ5VSHa4OI. Download publication: onlinelibrary.wiley.com/doi/full/10.11โ€ฆ
The Willi Hennig Society (@willihennigsoc) 's Twitter Profile Photo

#๐—ช๐—ผ๐—ฟ๐—ธ๐˜€๐—ต๐—ผ๐—ฝ "๐’๐ฉ๐ž๐œ๐ข๐ž๐ฌ ๐๐ข๐ฌ๐œ๐จ๐ฏ๐ž๐ซ๐ฒ ๐ฎ๐ฌ๐ข๐ง๐  ๐๐š๐ง๐จ๐ฉ๐จ๐ซ๐ž ๐ฌ๐ž๐ช๐ฎ๐ž๐ง๐œ๐ข๐ง๐ " ๐ข๐ฌ ๐œ๐จ๐ง๐Ÿ๐ข๐ซ๐ฆ๐ž๐! Registration for #HennigMeeting2024 is FREE for attendees of any of the available courses!๐Ÿคฏ #NanoporeSequencing #SpeciesDiscovery #IntegrativeTaxonomy

#๐—ช๐—ผ๐—ฟ๐—ธ๐˜€๐—ต๐—ผ๐—ฝ "๐’๐ฉ๐ž๐œ๐ข๐ž๐ฌ ๐๐ข๐ฌ๐œ๐จ๐ฏ๐ž๐ซ๐ฒ ๐ฎ๐ฌ๐ข๐ง๐  ๐๐š๐ง๐จ๐ฉ๐จ๐ซ๐ž ๐ฌ๐ž๐ช๐ฎ๐ž๐ง๐œ๐ข๐ง๐ " ๐ข๐ฌ ๐œ๐จ๐ง๐Ÿ๐ข๐ซ๐ฆ๐ž๐!
Registration for #HennigMeeting2024 is FREE for attendees of any of the available courses!๐Ÿคฏ

#NanoporeSequencing #SpeciesDiscovery #IntegrativeTaxonomy
Rudolf Meier @rudolf-meier.bsky.soci (@rudolfmeier15) 's Twitter Profile Photo

Dark Taxon Science: In a tale of two realities, we here try to foster an epoch of biodiversity enlightenment while being threatened by the shadows of mass extinction: megabarcoding shows that two dark taxa in the Baihua Mountains behave very differently! doi.org/10.1101/2024.0โ€ฆ

Rudolf Meier @rudolf-meier.bsky.soci (@rudolfmeier15) 's Twitter Profile Photo

๐Ÿšจ EntoSieve: New automated tool for fast, accurate size-sorting of bulk insect samples! Perfect for boosting DNA megabarcoding & metabarcoding projects. ๐Ÿงฌ๐Ÿ”ฌ DIY low-cost device, gentle on specimens and yet efficient ๐Ÿฆ‹๐Ÿžread here: authorea.com/users/836612/aโ€ฆ

Center for Integrative Biodiversity Discovery (@cibd_mfnberlin) 's Twitter Profile Photo

โš ๏ธ#NewPaperAlert ๐Ÿฆ‹ ๐‡๐š๐ฅ๐Ÿ ๐จ๐Ÿ ๐ญ๐ก๐ž ๐ƒ๐ข๐ฏ๐ž๐ซ๐ฌ๐ข๐ญ๐ฒ ๐”๐ง๐๐ž๐ฌ๐œ๐ซ๐ข๐›๐ž๐: Integrative Taxonomy Reveals 32 New Species and a High Cryptic Diversity in the Scopariinae and Crambinae of the Philippines (Lepidoptera: Crambidae) By @TheoLeger1989 shorturl.at/5w9gy

โš ๏ธ#NewPaperAlert ๐Ÿฆ‹

๐‡๐š๐ฅ๐Ÿ ๐จ๐Ÿ ๐ญ๐ก๐ž ๐ƒ๐ข๐ฏ๐ž๐ซ๐ฌ๐ข๐ญ๐ฒ ๐”๐ง๐๐ž๐ฌ๐œ๐ซ๐ข๐›๐ž๐: Integrative Taxonomy Reveals 32 New Species and a High Cryptic Diversity in the Scopariinae and Crambinae of the Philippines (Lepidoptera: Crambidae)
By @TheoLeger1989 

shorturl.at/5w9gy
The Willi Hennig Society (@willihennigsoc) 's Twitter Profile Photo

โš ๏ธ#๐—ช๐—ผ๐—ฟ๐—ธ๐˜€๐—ต๐—ผ๐—ฝ๐—”๐—น๐—ฒ๐—ฟ๐˜๐Ÿงฌ #HennigMeeting2025 workshop in #HongKong next July! High-throughput Species Discovery Using Nanopore Sequencing: from Specimens to Species in a Few Days By: Rudolf Meier @rudolf-meier.bsky.soci, Amrita Srivathsan @asrivathsan.bsky.social, Vivian Feng from Center for Integrative Biodiversity Discovery cladistics.org/xlii-annual-meโ€ฆ

โš ๏ธ#๐—ช๐—ผ๐—ฟ๐—ธ๐˜€๐—ต๐—ผ๐—ฝ๐—”๐—น๐—ฒ๐—ฟ๐˜๐Ÿงฌ
#HennigMeeting2025 workshop in #HongKong next July!

High-throughput Species Discovery Using Nanopore Sequencing: from Specimens to Species in a Few Days
By: <a href="/RudolfMeier15/">Rudolf Meier @rudolf-meier.bsky.soci</a>, <a href="/asrivath/">Amrita Srivathsan @asrivathsan.bsky.social</a>, <a href="/vivianfeng1305/">Vivian Feng</a>
from <a href="/CIBD_mfnberlin/">Center for Integrative Biodiversity Discovery</a>

cladistics.org/xlii-annual-meโ€ฆ
Rudolf Meier @rudolf-meier.bsky.soci (@rudolfmeier15) 's Twitter Profile Photo

Dark Taxonomy: From unknown to ready for biomonitoring in 5 steps. By describing 120 species, most species of fungus gnats routinely caught in Singaporean Malaise traps now have names. Bees, butterflies and birds, make room for your new friends. Read here: onlinelibrary.wiley.com/doi/10.1111/clโ€ฆ

Rudolf Meier @rudolf-meier.bsky.soci (@rudolfmeier15) 's Twitter Profile Photo

Species- versus specimen-level congruence between DNA barcodes and morphology. Species-level dominates papers but specimen-level matters more for sample evaluation. Read more in "Illuminating Entomological Dark Matter with DNA Barcodes..." in Ann Rev Ent: annualreviews.org/content/journaโ€ฆ

Species- versus specimen-level congruence between DNA barcodes and morphology. Species-level dominates papers but specimen-level matters more for sample evaluation. Read more in "Illuminating Entomological Dark Matter with DNA Barcodes..." in Ann Rev Ent: annualreviews.org/content/journaโ€ฆ
Rudolf Meier @rudolf-meier.bsky.soci (@rudolfmeier15) 's Twitter Profile Photo

UITOTO for taxonomy. Get your molecular diagnoses right without coding or breaking a sweat! Use state-specific, contrastive DMCs instead of fuzzy consensus barcodes! ๐Ÿชฐ๐Ÿฆ‹๐Ÿชฑ๐ŸฆŽ๐Ÿฆ€๐ŸŒ๐Ÿฆ‰ doi.org/10.1101/2025.0โ€ฆ

The Willi Hennig Society (@willihennigsoc) 's Twitter Profile Photo

โš ๏ธ #WorkshopUpdate ๐Ÿงฌ Spots still available for our #HennigMeeting2025 workshop in #HongKong ๐Ÿ‡ญ๐Ÿ‡ฐthis July! High-throughput Species Discovery Using Nanopore Sequencing Instructors: Amrita Srivathsan @asrivathsan.bsky.social, Rudolf Meier @rudolf-meier.bsky.soci, & Vivian Feng + Info: cladistics.org

โš ๏ธ #WorkshopUpdate ๐Ÿงฌ

Spots still available for our #HennigMeeting2025 workshop in #HongKong ๐Ÿ‡ญ๐Ÿ‡ฐthis July!  

High-throughput Species Discovery Using Nanopore Sequencing
Instructors: <a href="/asrivath/">Amrita Srivathsan @asrivathsan.bsky.social</a>, <a href="/RudolfMeier15/">Rudolf Meier @rudolf-meier.bsky.soci</a>, &amp; Vivian Feng

+ Info: cladistics.org
Rudolf Meier @rudolf-meier.bsky.soci (@rudolfmeier15) 's Twitter Profile Photo

๐Ÿšซ Farewell to species descriptions with consensus barcodes โœจ Hello to Diagnostic Molecular Combinations (DMCs) โœ… State-specific โœ… Contrastive โœ…Publication-ready Now even easier with the latest UITOTO, our updated user-friendly software; Preprint: doi.org/10.1101/2025.0โ€ฆ

Cladistics Journal Alert (@cladisticsalert) 's Twitter Profile Photo

โš ๏ธ#NewPaperAlert๐Ÿฆ€ A new morphological phylogeny of Malacostraca comparing the application of character dependencies and implied weighting. By Grams et al. doi.org/10.1111/cla.12โ€ฆ #Cladistics #Phylogenetics #Morphology #ImpliedWeights #CharacterDependency #Malacostraca

โš ๏ธ#NewPaperAlert๐Ÿฆ€
A new morphological phylogeny of Malacostraca comparing the application of character dependencies and implied weighting.

By Grams et al.  
doi.org/10.1111/cla.12โ€ฆ

#Cladistics #Phylogenetics #Morphology #ImpliedWeights #CharacterDependency #Malacostraca
Rudolf Meier @rudolf-meier.bsky.soci (@rudolfmeier15) 's Twitter Profile Photo

The top 10 flying insect clades rule the skiesโ€”but defy the rules. Weak or inverted latitudinal diversity gradients leave biogeographers puzzled. Entomologists?ย Mildlyย amused. biorxiv.org/content/10.110โ€ฆ