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Interesting study Callum Ives @ElisaTelisa shows how important is N-glycosylation at N343 for receptor binding domain of SARS-CoV-2 tinyurl.com/323m9e85 #glycotime

Excited to share the Version of Record of our eLife - the journal paper! In this work we show through extensive MD sims (@ElisaTelisa) & ESI-MS (Klassen Group) how glycosylation of SARS-CoV-2 S RBD works with the protein structure to modulate co-receptor binding! doi.org/10.7554/eLife.…

Meet CandyCrunch, our AI-glycomics model featured in Nature Methods! Trained on 500k spectra for rapid glycomics analysis on all glycan types. @ElisaTelisa, Callum Ives, Niclas Karlsson, James Urban More data=better models, so keep on uploading! #glycotime nature.com/articles/s4159…

Out now! CandyCrunch is a deep learning-based tool for predicting glycan structures from tandem mass spectrometry data. James Urban Niclas Karlsson Callum Ives @ElisaTelisa Daniel Bojar nature.com/articles/s4159…

🚨 We've updated the glycan structure database on GlycoShape (glycoshape.org)! You can now search through and rebuild glycoproteins with 453 unique glycans 🥳 Glycans are now primarily listed by their GlyTouCan IDs Gly Kiyoko Kinoshita 🎉 #glycotime

Our pre-print "Comparative evaluation of methods for the prediction of protein-ligand binding sites" is out on Research Square. Check it out! 🔗 tinyurl.com/Utges-LBS-comp On this paper we benchmark 11 ligand binding site prediction tools on our curated reference dataset: LIGYSIS!

Refining Martini Force Field Interactions for Accurate Glycoprotein Modeling biorxiv.org/cgi/content/sh… #biorxiv_biophys

GlyGen & collaborators shared on their curation workshop held in Padua, Italy. Discover how bioinformatics resources are advancing the collection and annotation of glycan function-related data. Thx Int Soc Biocuration SFGlycobiology pubmed.ncbi.nlm.nih.gov/39137905/

Hydrophobic residues at the channel gate allow only the monovalent cations to pass through the TRPM5 ion channel, simulations revealed a new channel mechanism. ow.ly/44QJ50TAgO0

Excited to share my first paper has been published in Nature Methods!! A big thanks to my amazing co-authors Callum Ives and of course to the support of my team and my supervisor @ElisaTelisa 🎉🎉🎉🔺🟢🟦

Beautiful #glycotime work by @ElisaTelisa Callum Ives Ojas Singh Oracle GlycoShape🔺🟨🟦🟢 Visit: glycoshape.org Read: nature.com/articles/s4159…

New Nature Methods #glycotime! Restoring protein glycosylation with GlycoShape (glycoshape.org) ihttps://www.nature.com/articles/s41592-024-02464-7 @ElisaTelisa University of Southampton

GlycoShape, a web-based platform, supplements 3D glycoprotein structures with missing structural information about glycans. @ElisaTelisa nature.com/articles/s4159…

🎓Five of #ATU researchers have been named among the World’s Top 2% Most Cited Scientists, according to an updated analysis by Emeritus Professor John Ioannidis from Stanford University in collaboration with Elsevier BV and SciTech Strategies Inc. ✍️ atu.ie/news/atu-resea…

🚨 New #P2Rank release out! P2Rank can now run fpocket directly and then re-score predictions with PRANK. Additionally, ChimeraX (bsky: chimerax.ucsf.edu) is now supported for structure visualisation. Glad to have had my tiny contribution to this feature! And it looks so good! PDB: 4GQQ Protein Data Bank