
Cambridge Baker Systems Genomics Initiative
@cambakersgi
A joint research initiative based at the University of Cambridge and the Baker Heart & Diabetes Institute
ID: 1047351733972688897
https://www.inouyelab.org 03-10-2018 05:04:47
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Out today in Nature Genetics! Important new updates to the Polygenic Score (PGS) Catalog, & a new software tool that simplifies the calculation of polygenic scores in the context of genetic ancestry 👉 tinyurl.com/fa5ts5a3 Sam Lambert @minouye271 Dr. Scott C. Ritchie Florent Yvon


📣 New updates to the PGS Catalog. These include multi-ancestry data and a new Calculator to simplify PGS calculations across different ancestries. Learn more about how these updates could enable more equitable disease risk predictions. ebi.ac.uk/about/news/tec…


📢 The Polygenic Score (PGS) Catalog has been updated, including data added from multi-ancestry or non-European populations and a PGS Catalog calculator. The project is a collaborative effort between Cambridge University, EMBL-EBI and NHGRI-EBI GWAS Catalog. Learn more: hubs.li/Q02Rdfc60

Important updates to the largest open #database for #polygenicscores could generate more equitable disease risk predictions for diverse range of #ethnicbackgrounds, thanks to work by Cambridge Baker Systems Genomics Initiative Nature Genetics @minouye271 baker.edu.au/news/institute…

Check out the latest developments of all things PGS Catalog, out now in Nature Genetics (🔗: rdcu.be/dVakA )! In this paper we describe big increases in the data content (and diversity) and our tool for PGS calculation (github.com/PGScatalog/pgs…).


Pleased to be part of this work through Cambridge Baker Systems Genomics Initiative, a research partnership between the Baker Institute & Cambridge University to expand our ability to access big data & expertise to target approaches in #diseaseprediction & #personalisedmedicine

Proud to support research published in Nature Genetics that has added multi-ancestry & non-European population data to make calculating PGS easier and more reproducible: bit.ly/4eQxDxV Cambridge Baker Systems Genomics Initiative EMBL-EBI Cambridge University Cambridge University Hospitals NHS National Institute for Health and Care Research Photo: Karen Arnott/EMBL-EBI


Genome-wide association testing beyond SNPs go.nature.com/3ZVoP5Y #Review by Laura Harris, Ellen McDonagh, Xiaolei Zhang 张小蕾, Katherine Fawcett, Amy Foreman, Petr Daneck, Panagiotis Sergouniotis, Helen Parkinson, Francesco Mazzarotto, @minouye271, Ed Hollox, Ewan Birney & Tomas Fitzgerald EMBL-EBI

Really enjoyed being part of the International Day of Women in Statistics and Data Science with Leandra Bräuninger & Dr Elinor Laws! Thanks Data Science for Health Equity for inviting me, and to the organisers Caucus for Women in Statistics and Data Science 😄


Looking to the future, we ask what kind of genetic variation will be a priority for genome wide studies in the coming years, and how can we make sure the data is FAIR? Read more Nature Reviews Genetics 👇Thanks to Tomas Fitzgerald & all involved! nature.com/articles/s4157…


Out in Nature Communications! Abdominal aortic aneurysm is a serious condition where the abdominal aorta enlarges & can rupture CEU colleagues used a polygenic risk score (PRS) to investigate the genetic risk & if you can use PRS to inform age for screening 🔗 tinyurl.com/mr3mupbc


📢Out in EMBO The Heidelberg Agreement on Environmental Sustainability in Research Funding, a new policy co-authored by Loïc Lannelongue Principles and recommendations for research funders on how to embed sustainable practices via research funding 🌱 🔗tinyurl.com/2vk7nbc3


📢Fully-funded PhD studying the comorbidities of high adiposity. 🔗: jobs.cam.ac.uk/job/48333/ (2 weeks left, due November 20) Great work environment BHF Cardiovascular Epidemiology Unit at Cambridge VPD Heart & Lung Research Institute, collab with AstraZeneca Xiao JIANG CambridgeATS. DM or e-mail for informal enquiries.

Interested in software tools for calculating polygenic scores? Sam Lambert & @nebfield are giving an EMBL-EBI Training webinar December 4th about our pgsc_calc tool and it's capabilities for reproducible PGS calculation: ebi.ac.uk/training/event…! Join in or catch the recording after.



My group's work dissecting the contribution of common variants to rare neurodevelopmental conditions is now out at nature.com/articles/s4158…. See this thread from co-first authors Qinqin Huang and Emilie Wigdor with a summary of the key findings.


Until further notice, from today the Cambridge Baker Systems Genomics Initiative will not be posting or checking this account. We are available at blue sky bsky.app/profile/cambri…