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Our preprint on Machine Learning prediction of grapevine scion and rootstock cultivar using soil microbiome data. Lakshay Anand University of Kentucky Martin-Gatton CAFE biorxiv.org/content/10.110…

At UC Davis to work with Dario Cantu and Manon Paineau on our diploid genome assembly project of grapevine downy mildew : so glad to be invited to the lab meeting gathering Mirella, Jadran, Noé, Mélanie, Rosa and Manon.

Garcia et al of the Dario Cantù at UC Davis generated pangenomes of 50 global isolates collected from infected grapevine trunks. The genomic architecture of 3 fungal species were evaluated giving clues to the underlying mechanisms of virulence.🍇 Read Here! doi.org/10.1094/MPMI-0…

New genome available! Eutypa lata EN209, published in MPMI apsjournals.apsnet.org/doi/10.1094/MP…, available at grapegenomics.com/pages/Elata/. Used in the same study, Neofusicoccum parvum UCD646So grapegenomics.com/pages/P_Nparvu… and Phaeoacremonium minimum PM1119 grapegenomics.com/pages/P_Pminim… are also available.

New genome available! Vitis vinifera cv. Malbec cl. 136N, by LucianoCalderon, Pablo Carbonell-Bejerano, @PlantEvolution, Diego Lijavetzky et al., published in Horticulture Research academic.oup.com/hr/advance-art…, available at grapegenomics.com/pages/VvMalbec/

The Vitis vinifera cv. Muscat of Alexandria cl. FPS02 genome is now available at chromosome scale! grapegenomics.com/pages/VvMuscAl…

Our July issue is live! shorturl.at/t0D92 The cover image is from Dario Cantù (Dario Cantù), who reviews “the wild side” of GrapeGenomics. Recombination loss in sex chromosomes, functional genomics at scale, camouflage genetics, and more are also reviewed in the issue.

Our take on Trends in Genetics of the recent genomic research on wild grape species: a story of plant collection, diploid genomes, graph pangenomes, domestication, flower sex, biotic and abiotic stress resistance, and community data sharing GrapeGenomics - cell.com/trends/genetic…

📢 NEW GENOME ALERT New from Dario Cantù in #G3journal: The new genomes of four species of plant pathogen fungi associated with the grapevine trunk disease esca reveal dynamic evolutionary patterns in cell wall decomposition, xenobiotic degradation genes. bit.ly/4g4egmO

We're hiring an Assistant Professor in Sensory Science to join the Viticulture and Enology department at UC Davis. recruit.ucdavis.edu/JPF06782

Closing my X account. See you all on the brighter side! 🌟 bsky.app/profile/cantul…

Fresh from the lab 🍇🧬: biorxiv.org/content/10.110…. We describe long-term conservation of haplotype-specific methylation patterns in clonal lineages, resolving mapping bias, collapsed haplotypes, and structural variation using a novel phased, graph-based approach.