Nicolai Dorka (@dorkanico) 's Twitter Profile
Nicolai Dorka

@dorkanico

ID: 1851403956

calendar_today10-09-2013 13:01:16

25 Tweet

20 Followers

165 Following

Lucien Hinderling (@lhinderling) 's Twitter Profile Photo

GPU accelerated live segmentation of nuclei using #clesperanto 🚀 Cells are MCF10A with H2B marker. Getting around 0.5 FPS at 512x512px Robert Haase napari

Yue Qin (@yue_qin_sysbio) 's Twitter Profile Photo

Really excited to share our work that's now online nature, introducing a novel AI approach to integrate confocal images in the Human Protein Atlas (Emma Lundberg) with AP-MS data in BioPlex (Ed Huttlin) to create a unified map of human cell architecture. nature.com/articles/s4158…

Emma Lundberg (@prof_lundberg) 's Twitter Profile Photo

New commentary article on the future of cell imaging “The new era of quantitative cell imaging—challenges and opportunities”. Views from myself, Anne Carpenter, PhD, Neda Bagheri, Anne Plant and Rick Horwitz. sciencedirect.com/science/articl…

New commentary article on the future of cell imaging 
“The new era of quantitative cell imaging—challenges and opportunities”. 
Views from myself, <a href="/DrAnneCarpenter/">Anne Carpenter, PhD</a>, Neda Bagheri, Anne Plant and Rick Horwitz.
sciencedirect.com/science/articl…
VaughanLabUW (@vaughanlabuw) 's Twitter Profile Photo

Fly-through of an expanded mouse kidney, stained by former grad student Chenyi Mao and imaged by the fantastic Adam Glaser in Jonathan Liu lab. Happy #FluorescenceFriday

Emma Lundberg (@prof_lundberg) 's Twitter Profile Photo

The Blood Proteoform Atlas by Rafael Melani and Neil Kelleher is a beautiful and massive #TopDownProteome effort showing that proteoforms have higher cell-type specificity than proteins. A mind-boggling pleasure to have been part of this work. science.org/doi/10.1126/sc…

Emma Lundberg (@prof_lundberg) 's Twitter Profile Photo

Decades after the genome project the bias in functional characterization of the human proteome is still massive: We need coordinated efforts (+funding) to systematically characterize the functions of all human proteins! (incl moonlighting and multifunctionality)

Emma Lundberg (@prof_lundberg) 's Twitter Profile Photo

Deep Visual Proteomics - leveraging imaging and mass spec for deep #spatialomics in native FFPE tissue, in Nature Biotechnology today rdcu.be/cNU70. Great collaboration led by the dream team Matthias Mann Lab Peter Horvath and Andreas Mund -> Towards #digitalmolecularpathology 🌟

Matthias Mann Lab (@labs_mann) 's Twitter Profile Photo

Are you looking for #DeepLearning models to predict peptide properties for #proteomics in just a few lines of code? AlphaPeptDeep, built on #PyTorch can do that and more. We show it with a HLA peptide prediction model to boost HLA DIA analysis. Check out: biorxiv.org/cgi/content/sh…

Are you looking for #DeepLearning models to predict peptide properties for #proteomics in just a few lines of code? AlphaPeptDeep, built on #PyTorch can do that and more. We show it with a HLA peptide prediction model to boost HLA DIA analysis. Check out:
biorxiv.org/cgi/content/sh…
Holger Heyn (@hoheyn) 's Twitter Profile Photo

SPATIAL GENOMICS entering the main stage! Proud seeing our Review Nature Reviews Genetics on #spatial profiling technologies out! Wonderful collaboration with Emma Lundberg Emma Lundberg and Jeff Moffitt. The future is now for in situ #singlecell genomics! nature.com/articles/s4157…

Emma Lundberg (@prof_lundberg) 's Twitter Profile Photo

Amazing how the field of spatial omics is growing 🌟 Here’s our take on the past, present and future of #spatial genomics, transcriptomics and proteomics in Nature Reviews Genetics . Fun collab writing with Holger Heyn and Jeff Moffit! nature.com/articles/s4157…

Emma Lundberg (@prof_lundberg) 's Twitter Profile Photo

Help us hack the human body! 😉 Join the @proteinatlas and Human BioMolecular Atlas Program (HuBMAP) competition at Kaggle and develop #MachineLearning models for segmentation of functional tissue units from microscope images. kaggle.com/competitions/h…

Matthias Mann Lab (@labs_mann) 's Twitter Profile Photo

Deep Visual Proteomics for single-cell-type tissue #proteomics is out in print and made it to the cover of Nature Biotechnology. Thanks to Nature Biotechnology and all the authors who helped us developing this into a working pipeline!

Luciano Martelotto 🛠🧬💻🇦🇺 (@lgmartelotto) 's Twitter Profile Photo

Registrations are open to the CSHL Single Cell Analysis 2023 Amazing 2-weeks bootcamp that you can’t miss. Appl. due March 15. ⁦Brought to you by Mike (Mike McConnell⁩), Dave, Jules and your truly 😅 ⁦⁦CSHL Courses⁩ ⁦Uni of Adelaide⁩ meetings.cshl.edu/courses.aspx?c…