Grateful for incredible trainees who led this work(Hannah Wastyk, Gabi Fragiadakis), collaborator Christopher Gardner, participants, and !DONORS! whose generosity made our Fermented/Fiber/Food (FeFiFo) study possible. Enjoy good food and good health. authors.elsevier.com/a/1dOdeL7PXe%7…

Fun collaboration with Dr. Wang and Dr. Blaser on studying immunologic and molecular signatures during AML treatment - my first paper from UCSF. Thanks to @Arrkal and Gabi Fragiadakis for this opportunity! bloodcancerdiscov.aacrjournals.org/content/early/…

My Cell paper on the Fermented Fiber Food Study (FeFiFo) with Gabi Fragiadakis , The Sonnenburg Lab, and Christopher Gardner was just featured in the New York Times!! nytimes.com/2021/08/13/wel… #research #fermentedfoods #fiber #newyorktimes #nytimes #fermentation #inflammation #health

Fermented Food & Microbiome Thx anahad oconnor for great coverage of #FeFiFo study The New York Times Cell paper here: 👇 authors.elsevier.com/c/1dOdeL7PXe~ww Such an honor & pleasure working w/ The Sonnenburg Lab on this, particularly lead authors Hannah Wastyk & Gabi Fragiadakis nytimes.com/2021/08/13/wel…

Online today Cell. By identifying and classifying recurrent immune features, we discovered 12 unique dominant tumor Archetypes that span cancer types. This immune-based classification provides a framework toward understanding tumor immunity to guide immunotherapies 1/n.

Excited to announce that lab member Justine Levan has been awarded the The American Association of Immunologists (AAI) Intersect Fellowship and will be collaborating with Gabi Fragiadakis to hone her computational skills! Congrats Justine Levan!

Looking for a postdoc position? Interested in systems immunology, the microbiome, and preterm birth? Apply for a postdoc at UCSF with Dr. Joanna Halkias and myself to lead a funded collaborative, translational project studying early life pathologies. dscolab.ucsf.edu/postdoc-human-…

Made it up on the big screen at #AAI2022!

I am one of the leaders on a large industry-academic research alliance, called the AutoImmunoprofiler Consortium, and we are looking for a Project Manager! See job description here: docs.google.com/document/d/1rQ…

Looking for a project manager role at UCSF? Want to make an impact in autoimmune disease? Apply today! sjobs.brassring.com/TGnewUI/Search…

Want to make a big impact in HIV research? Advanced skills in computational biology/ data science? Apply! Senior Biological Data Scientist in Immunology | University of California San Francisco sjobs.brassring.com/tgwebhost/jobd…

Are you a software engineer who wants to make a difference in biology, including in cancer, viral infection, and autoimmune disease? Apply to join our Data Library engineering team at UCSF! sjobs.brassring.com/TGnewUI/Search…

Big congrats to another IgE member Charlotte Wang from the UCSF Bakar ImmunoX Initiative retreat for winning second place and technical winner in the UCSF ICBI Hackathon presented by Gabi Fragiadakis!

Everyone is a winner when we share data. Gabi Fragiadakis, Jimmie Ye and Alexis Combes organized this year’s hackathon wherein students analyzed large cancer datasets from out patients to find new associations with disease. Good will come of this. ucsf.edu/news/2022/09/4…

At UCSF's #hackathon, students mined data and shared findings with judges and peers. “Bringing biology and data expertise together makes for the best insights and an environment of mutual learning,” data scientist and co-organizer Gabi Fragiadakis says. ucsfh.org/3SeRNXR

I am Elaine,I recently graduated with my PhD in Immunology from @UChicagoImmuno. I am currently interested in factors influencing immune development in early life 👩‍🍼👶 and will be starting my postdoc at UC San Francisco Joanna Halkias Gabi Fragiadakis #BlackInImmunoRollCall #BlackinImmuno

Interdisciplinary teams of scientists, clinicians + patient leaders aim to characterize the cellular mechanisms underlying rare pediatric inflammatory diseases using #SingleCell analysis 🧬 chanzuckerberg.com/patient-partne…

Very excited to be embarking on this single-cell analysis of JDM with my co-PIs Drs. Jessica Neely, Jessica Turnier, Michelle Kahlenberg, and Andrew Heaton! Thank you CZI Science for your support!

Use your skills to build tools for UCSF researchers to understand disease. Apply to be a front-end engineer for our Data Library project, an online platform for storing, analyzing, exploring, and sharing multi-omic biological data from patients sjobs.brassring.com/tgwebhost/jobd…

Our new pipeline with Alexis Combes Ravi K. Patel and Rebeca Jaszczak out now! Cyclone: an accessible pipeline to analyze, evaluate, and optimize multiparametric cytometry data frontiersin.org/articles/10.33…