Germinate Hub (@germinatehub) 's Twitter Profile
Germinate Hub

@germinatehub

Germinate provides a fully featured open-source plant genetic resources platform #germinate #bioinformatics #pgr @HuttonICS @cropgeeks @JamesHuttonInst

ID: 1263485844549259265

linkhttps://ics.hutton.ac.uk/get-germinate calendar_today21-05-2020 15:05:55

179 Tweet

153 Followers

46 Following

Sebastian Raubach @BazRaubach.bsky.social (@bazraubach) 's Twitter Profile Photo

Thanks to everyone turning up to my presentation at Leibniz IPK where I talked about #GridScore, Germinate Hub and #Helium for genotypic, phenotypic, and pedigree data and highlighted why expecting "Everything everywhere all at once" from an #RSE is unrealistic.

Thanks to everyone turning up to my presentation at <a href="/LeibnizIPK/">Leibniz IPK</a> where I talked about #GridScore, <a href="/GerminateHub/">Germinate Hub</a> and #Helium for genotypic, phenotypic, and pedigree data and highlighted why expecting "Everything everywhere all at once" from an #RSE is unrealistic.
International Barley Hub (@intbarleyhub) 's Twitter Profile Photo

Great blog from Sebastian Raubach @BazRaubach.bsky.social, who was invited to present his work on #bioinformatics research software development, at Leibniz IPK. The visit included a tour of the PhenoSphere – chambers in which environmental conditions can be strictly controlled. More: bit.ly/3ytIhuD

Great blog from <a href="/BazRaubach/">Sebastian Raubach @BazRaubach.bsky.social</a>, who was invited to present his work on #bioinformatics research software development, at <a href="/LeibnizIPK/">Leibniz IPK</a>.

The visit included a tour of the PhenoSphere – chambers in which environmental conditions can be strictly controlled.

More: bit.ly/3ytIhuD
Sebastian Raubach @BazRaubach.bsky.social (@bazraubach) 's Twitter Profile Photo

We have released a new version of #GridScore. A new statistical overview over you trials shows active periods, area covered and much more. We also added support for defining trial contributors and their responsibilities. #phenotyping James Hutton Institute The Crop Trust 1/3

We have released a new version of #GridScore. A new statistical overview over you trials shows active periods, area covered and much more. We also added support for defining trial contributors and their responsibilities.
#phenotyping <a href="/JamesHuttonInst/">James Hutton Institute</a> <a href="/CropTrust/">The Crop Trust</a> 
1/3
Sebastian Raubach @BazRaubach.bsky.social (@bazraubach) 's Twitter Profile Photo

Thanks to our collaboration with Alan Humphries as part of #BoldCWR The Crop Trust we have added support for highlighting of controls/checks in the data input as well as visualizations. Thanks to Michael Major for the last photo. 2/3

Thanks to our collaboration with <a href="/lucernebreeder/">Alan Humphries</a> as part of #BoldCWR <a href="/CropTrust/">The Crop Trust</a> we have added support for highlighting of controls/checks in the data input as well as visualizations. Thanks to <a href="/MichaelMajorMed/">Michael Major</a>  for the last photo.
2/3
Sebastian Raubach @BazRaubach.bsky.social (@bazraubach) 's Twitter Profile Photo

We only just released a new version with lots of features, but development never stops! Next feature coming soon is a germplasm performance page showing how well a germplasm performs against the rest of the trial per trait. #phenotyping #GridScore

We only just released a new version with lots of features, but development never stops!
Next feature coming soon is a germplasm performance page showing how well a germplasm performs against the rest of the trial per trait.

#phenotyping #GridScore
Sebastian Raubach @BazRaubach.bsky.social (@bazraubach) 's Twitter Profile Photo

Happy to announce another update to #GridScore for even more #phenotyping goodness. Have a look through the thread for more details. gridscore.hutton.ac.uk 1/7

Happy to announce another update to #GridScore for even more #phenotyping goodness. Have a look through the thread for more details.

gridscore.hutton.ac.uk

1/7
Sebastian Raubach @BazRaubach.bsky.social (@bazraubach) 's Twitter Profile Photo

📈 We've added a germplasm performance page so you can see how a particular germplasm compares to the rest of the trial on a trait by trait basis. 2/7

📈 We've added a germplasm performance page so you can see how a particular germplasm compares to the rest of the trial on a trait by trait basis.

2/7
Sebastian Raubach @BazRaubach.bsky.social (@bazraubach) 's Twitter Profile Photo

🏷️Two new trait types have been added in the form of a GPS trait and an image trait. These let you record the GPS position of an entity and take pictures of it respectively. 3/7

🏷️Two new trait types have been added in the form of a GPS trait and an image trait. These let you record the GPS position of an entity and take pictures of it respectively.

3/7
Sebastian Raubach @BazRaubach.bsky.social (@bazraubach) 's Twitter Profile Photo

🗺️ A new example trial has been added showcasing the new GPS trait as well as a different use-case for GridScore where we scored data on cows. 4/7

🗺️ A new example trial has been added showcasing the new GPS trait as well as a different use-case for GridScore where we scored data on cows.

4/7
Sebastian Raubach @BazRaubach.bsky.social (@bazraubach) 's Twitter Profile Photo

⛶ A new setting will let you choose if you want the stepper buttons next to a whole number input to be bigger. This can be useful if you're using it for counting. We're working on adding vibration feedback as well. 📳 6/7

⛶ A new setting will let you choose if you want the stepper buttons next to a whole number input to be bigger. This can be useful if you're using it for counting. We're working on adding vibration feedback as well. 📳

6/7
Sebastian Raubach @BazRaubach.bsky.social (@bazraubach) 's Twitter Profile Photo

That's all for now! But there'll be many more things to look forward to in the near future, so keep an eye out! In the meantime, why not check out the new cow trial or any of the other new features? 7/7 gridscore.hutton.ac.uk

Germinate Hub (@germinatehub) 's Twitter Profile Photo

As part of an upcoming new release of #Germinate, we're looking into spider/radar charts. These are very useful for sensory data, but are also more generally useful for #trials data.

As part of an upcoming new release of #Germinate, we're looking into spider/radar charts. These are very useful for sensory data, but are also more generally useful for #trials data.
Sebastian Raubach @BazRaubach.bsky.social (@bazraubach) 's Twitter Profile Photo

We've got some exciting new features coming in the next big release of #GridScore like providing trait reference images, self-hosting a GridScore server and new export formats! Stay tuned for the new release soon. #phenotyping #bioinformatics ICS James Hutton gridscore.hutton.ac.uk

We've got some exciting new features coming in the next big release of #GridScore like providing trait reference images, self-hosting a GridScore server and new export formats!
Stay tuned for the new release soon.
#phenotyping #bioinformatics
<a href="/HuttonICS/">ICS James Hutton</a>
gridscore.hutton.ac.uk
Paul Shaw (@pauldshaw) 's Twitter Profile Photo

We (Sebastian Raubach @BazRaubach.bsky.social and I) have been running training today on Germinate Hub and #gridscore at the EMBL-EBI training course 'Plant genomes: from data to discovery'. Participants from all around the world learning about the tools we develop at International Barley Hub James Hutton Institute

We (<a href="/BazRaubach/">Sebastian Raubach @BazRaubach.bsky.social</a> and I) have been running training today on <a href="/GerminateHub/">Germinate Hub</a> and #gridscore at the <a href="/emblebi/">EMBL-EBI</a> training course 'Plant genomes: from data to discovery'. Participants from all around the world learning about the tools we develop at <a href="/IntBarleyHub/">International Barley Hub</a> <a href="/JamesHuttonInst/">James Hutton Institute</a>
Paul Shaw (@pauldshaw) 's Twitter Profile Photo

Join our Breeding Value webinar tomorrow morning at 9:30am GMT where @bazraubach will talk about the work we have been doing at @jameshuttoninst on creating a central Germinate Hub database to store experiemental data. More info breedingvalue.eu/news/webinar-i…

Join our <a href="/BreedingValue/">Breeding Value</a>  webinar tomorrow morning at 9:30am GMT where @bazraubach will talk about the work we have been doing at @jameshuttoninst on creating a central <a href="/GerminateHub/">Germinate Hub</a> database to store experiemental data. More info breedingvalue.eu/news/webinar-i…
Malcolm Macaulay (@malcolmacaulay) 's Twitter Profile Photo

The James Hutton Institute BEST-CROP project team produced very cool stickers to promote our work using the Germinate database. Find out more here: germinateplatform.github.io/get-germinate/

The <a href="/JamesHuttonInst/">James Hutton Institute</a> <a href="/best_crop/">BEST-CROP</a> project team produced very cool stickers to promote our work using the Germinate database.
Find out more here: germinateplatform.github.io/get-germinate/