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Casey’s lab develops methods to analyze big biological data and makes these tools/data accessible for the rest of us. If you want a brilliant and inspiring postdoc mentor with a refreshing irreverence for the status quo, look no further! x.com/greenescientis…

#GI2018 Casey Greene shows that PLIER can be applied to many datasets and you can use the latent vars to ID function across OTHER datasets. bit.ly/MultiPLIER I think this is the PLIER package: github.com/wgmao/PLIER

Yesterday we celebrated with Nandita Garud who will be joining UCLA EEB as a new faculty in 2019! We are so excited for you Nandita!

"Revolutionizing scholarly writing with the Manubot: a foreshadow of publishing's future" by Daniel Himmelstein. Come see this and other amazing talks at #FORCE18 this October in Montreal! buff.ly/2ILp359

Manubot v0.2.0 now released at pypi.org/project/manubo… including the `manubot cite` command-line utility. Easily generate CSL metadata and references for 1000s of bibliographic styles from standard citation identifiers, such as doi:10.1038/nbt.3780; pmid:29424689; arxiv:1407.3561

Videos from #FORCE2018 now online. 🎥 See my talk on #Manubot at youtu.be/sGL0osdby0U?li… (playlist links to other talks). Thanks FORCE11 for the great recording & releasing it under a Creative Commons license… wish all conferences did this!

Our paper "Open collaborative writing with Manubot" is now available at PLOS Comp Biol. #Manubot uses Markdown + GitHub for continuous publication. doi.org/10.1371/journa… 1/8

Prodigious #SVG tutorial created by our frontend developer Vince Rubinetti. Learn how to code SVGs by hand with 6 practice exercises. greenelab.github.io/intro-to-svgs/

“Manubot is a series of software packages, as well as some of the glue to tie them together, that lets you turn a GitHub repository into a self-published manuscript.” natureindex.com/news-blog/thre…

New blog post from Kurt Wheeler about the #DataRefinery we're building! ccdatalab.org/blog/data-refi…

Research parasites wanted. Q&A w/ Casey Greene & J. Brian Byrd Lab on the #researchparasite & #researchsymbiont awards gigasciencejournal.com/blog/research-…

Manubot's use of Continuous Integration mentioned in @NatureNews at doi.org/cdvr. Manubot uses CI for continuous publication!

Anshul Kundaje (anshulkundaje@bluesky) Casey Greene One takeaway is that everyone was so helpful and constructive when reviewing new text. Working toward a common goal made it very different from typical manuscript review.

The accepted manuscript of the Sci Hub Coverage Study published in eLife - the journal (typeset version in the next few weeks) doi.org/10.7554/eLife.… Thanks Ariel Rodriguez Romero, Levernier, Munro, Steve McLaughlin🌾💾, @gedankenstuecke, and Casey Greene for your contributions!