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Sourya Bhattacharyya from Ferhat Ay's lab presents "Identifying differential chromatin contacts from HiChIP data" #ISMB2022

Next up, Siqi Shen from the Keles lab right here in Madison presents "scGAD: single-cell gene associating domain scores for exploratory analysis of scHi-C data" #ISMB2022

For some reason I've been thinking about the sword of Damocles all day .. ISCB RegSys

Now we shift focus to characterizing transcription factor binding elements using ML. Anusri Pampari from Anshul Kundaje (anshulkundaje@bluesky)'s lab presents "Base-resolution deep learning models of chromatin accessibility reveal combinatorial sequence motif syntax and regulatory variation" #ISMB2022

We are honored to have our final keynote presented by Dr. Zhiping Weng Zhiping Weng. She will tell us about "Landscapes of Human cis-regulatory Elements and Transcription Factor Binding Sites Evolutionarily Constrained in the Mammalian Lineage" #ISMB2022

And last but not least, Meghana Kshirsagar from Microsoft will present work with Christina Leslie and others titled "Dirichlet variational autoencoders for de novo motif discovery from accessible chromatin" #ISMB2022

And that's it! The RegSys track at #ISMB2022 is done for another year! Massive thanks to all of our keynote speakers, selected abstract speakers, and the tireless efforts of our COSI track organizing committee.

Next up for RegSys is the the 14th annual RECOMB/ISCB Conference on Regulatory & Systems Genomics with DREAM Challenges (RSGDREAM 2022). Nov 7th - 11th in Las Vegas. Hope to see you there! iscb.org/rsgdream2022

ISCB RegSys Julio Saez-Rodriguez @LuciaScience Rahul Satija Mingbo Day 2 ISCB RegSys #ISMB2022 3⃣outstanding keynotes Sushmita Roy @sroyyors.bsky.social,genomic.social+Furlan-Magaril_lab+Zhiping Weng 9⃣great talks #Chromatin #MotifDiscovery #TranscriptionFactor #BindingSites #RegulatoryElements #scHiC #3DGenome #MatrixFactorization #SingleCell #DeepLearning Wonderful COSI - Thank you! :)

And finally, thank you to our RegSys COSI track co-chairs: Alejandra Medina-Rivera Shaun Mahony Anthony Mathelier

We had several outstanding talks at #ISMB2022 #RegSys this year and it was very difficult to pick a best talk. Our committee has decided to split the RegSys Best Talk award two ways between Pia Rautenstrauch and Anusri Pampari. Congratulations to both!

Couldn't be happier to debut on Twitter with this exciting news! Thanks ISCB RegSys for letting me share my work and my lab Uwe Ohler is gone for their support! Big shout-out to the organizers, my fellow speakers, and participants for making the #ISMB2022 #RegSys track truly inspiring.

Teif Lab RegSys COSI at ISMB/ECCB2023 happening in Lyon ISCB RegSys iscb.org/ismbeccb2023

Registration and early abstract submission now open for the next ISMB/ECCB meeting iscb.org/ismbeccb2023. Join us July 23rd to 27th in sunny Lyon to hear about all the most exciting computational biology youtube.com/watch?v=STfQSV… ISMB/ECCB Conference

#ismbeccb2023 in Lyon is bigger than ever! Looking forward to talks and posters in ISCB RegSys COSI starting today. I present a poster (B-337) about computational analysis of transcription factor motifs produced in #JussiTaipale Lab. Medicine and Health, University of Helsinki CoE Tumor Genetics

Are you at #ISMBECCB2023? Wanna hear about designing cell type specific enhancers guided by deep learning models? Visit my poster today (B-346) and my talk tomorrow (17h20) at ISCB RegSys COSI!

Join us at 11.10am ISCB RegSys in room Rhone 2 for a talk by Vipin Kumar from my group, who will present his work on integrating HiC with CAGE to identify 3D-enriched transcriptional events. #RegSys #ISMBECCB2023

Welcome to the second day of the RegSys track at #ISMBECCB2023 ! We have three great keynotes today - Mikhail Spivakov is speaking now about #enhancers, after lunch we have @LauCan88 on #singlecell multiomics & AnaConesa covering new sequencing tech for #transcriptomics

You can now submit your new, unpublished work for publication as a proceedings paper at ISMB 2024! Full details are available at iscb.org/ismb2024/submi… - the deadline is January 25th #Bioinformatics #ComputationalBiology #ISMB2024

Submissions for technology track presentations are also open - go to iscb.org/ismb2024/submi… and apply by May 10th to showcase your bioinformatics/molecular biology software or hardware to the community #Bioinformatics #ComputationalBiology #ISMB2024