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Our latest work is on the cover of Nature Biotechnology <3 !

So great to see this work online! Check out our new, open source method to analyse brain data, based on deep learning and VR annotations! Great work Rami Doris Kaltenecker @moritz_negwer Ali Max Erturk

The DELiVR pipeline enables deep learning-based analysis of neuronal activity or other processes in the brain after tissue clearing and light-sheet imaging. DELiVR’s virtual reality approach facilitates the generation of training data for deep learning. nature.com/articles/s4159…

🎉We're thrilled to announce the #MICCAI2024 SELMA challenge on self-supervised learning for 3D light-sheet microscopy image segmentation. Explore our dataset, which contains 3D light-sheet microscopy images of various labeled structures and is possibly the largest 3D microscopy

What if we could map every cell in the body, revealing its location and molecular identity? In this @NatureMethods perspective, we discuss the new era of 3D-omics by tissue clearing and AI, called Deep 3D Histology: rdcu.be/dNBe8 PDF: bit.ly/3WaD0QU 🧵👇🏼

Excited to be a part of the team behind MouseMapper! 😎 Our new AI tool uncovers how diseases like obesity impact the body at a cellular level, from facial nerves to widespread inflammation 🧫🔬 Check our preprint 👇🏻

Super excited to share our latest preprint with you 🤩 We've tackled the challenge of visualizing obesity-induced changes in peripheral nerves and immune cells on the whole-body scale and developed an AI-powered pipeline to precisely quantify these changes.

Very excited to share our newes preprint! A holistic view of the impact of a disease on the whole body on the cellular level!

Very excited to share our newest preprint! Our new AI tool MouseMapper provides a pipeline to quantify the changes in peripheral nerves and immune cells in HFD mice.

Every cell matters! Check out our new study on obesity where we used deep learning-based quantitative analysis on whole bodies of obese mice as well as we applied spatial proteomics to extract underlying molecular mechanisms of structurally perturbed nerves!

Check out this interesting new dataset from our colleague and friend Florian Kofler ! 🔬🖥️

Thrilled to share our latest preprint: vesselFM – a foundation model for universal 3D blood vessel segmentation! 🚀✨ (arxiv.org/abs/2411.17386)

Our new study shows that SARS-CoV-2 spike protein accumulates & persists in the body for years after infection, especially in the skull-meninges-brain axis, potentially driving long COVID. mRNA vaccines help but cannot stop it🔬🧠🦠🧵👇Cell Host & Microbe cell.com/cell-host-micr…

#LongCOVID: SARS-CoV-2 Spike Protein Accumulation Linked to Long-Lasting Brain Effects A new study by #HelmholtzMunich & Universität München has revealed a mechanism that may explain the neurological symptoms of Long #COVID. 👉t1p.de/e1z7n 💡The researchers discovered

Come joins us as a PostDoc at Cornell. Join us to shape the future of AI in healthcare!  #Postdoc #AIResearch #CareerDevelopment #Cornell #MedicalImaging #CV #WeillCornell linkedin.com/posts/johannes…

SCP-Nano: Advancing Precision Medicine with Nanocarrier Visualization How can life-saving therapies reach their target cells without harmful side effects? 👉t1p.de/muluc 💡Researchers at #HelmholtzMunich, Universität München, and TU München have developed SCP-Nano

Check out our latest work, where we develop a method to investigate nanoparticle distribution in whole mouse bodies 🐁🦠💉🔎🔬

The validation phase of this year’s BraTS Inpainting Challenge is on! #BraTS2025 #Lighthouse #MICCAI Looking forward to seeing your creative and innovative ideas! synapse.org/Synapse:syn641…