🔥The 9th Round of Easy Loan, Earn $40 Reward is in progress❗️ ⏰ Promotion Period: January 15th - Feburary 15th, 2025 👉 Register now and check more details at gate.io/campaigns/358

If you are interested in gene-environment interactions, molecular phenotypes and single-cell genomics, join us at ⁦Institut Pasteur, since 1887⁩ in the sunny Paris! Post-doctoral position in single-cell genomics at Institut Pasteur in Paris docs.google.com/document/d/e/2…

We are very excited to present a major breakthrough achievement – the de novo design of synthetic enhancers for selected tissues in fruit fly embryos in vivo using deep- and transfer learning, @deAlmeida_BPet al published today in nature nature.com/articles/s4158…. Thread 👇(1/N)

I am looking for PhD research interns at the InstaDeep Paris office for the coming summer. Join us if you are interested in DNA LLMs and regulatory genomics! We have different projects available and are flexible to find one that fits your PhD. Link: instadeep.com/internship-off…

We released the weights and downstream task datasets of the agroNT, our 1B parameters DNA foundation model for plant genomics 🧬🪴. Check out our github (github.com/instadeepai/nu…) for Jax lovers⚡❤️and our Hugging Face space (huggingface.co/InstaDeepAI) for the pytorch version🤗.

Reposting this criticism of All of Us and their use of ancestry labels x.com/Graham_Coop/st…

InstaDeep's Javier Mendoza-Revilla will share how AI systems - and LLMs specifically - deepen our understanding of the Maize genome tomorrow at 7:20 pm at the Maize Genetics Meeting in Raleigh, NC. #MGM2024 Read the paper: biorxiv.org/content/10.110…

✨ Meet SegmentNT: the first-ever LLM capable of annotating DNA sequences at single nucleotide resolution. Built on top of our Nucleotide Transformer, SegmentNT offers precise genome annotation surpassing traditional methods and can offer deeper insights into our genome 🧬

Out now! Together with members of our Exec & Science Leadership Team EMBL-EBI Wellcome Sanger Institute GSK Genentech Pfizer Inc. Bristol Myers Squibb Sanofi we share our perspective on how Open Targets we use human genetics & genomics for drug target ID & prioritisation: annualreviews.org/content/journa…

Glad that our sequence model of promoters in human genome is now published in Science Magazine. Check out the paper for a deep dive into the sequence basis of transcription initiation at the basepair level: science.org/doi/10.1126/sc…

Very proud to announce ChatNT, the first multimodal conversational agent for biological sequences🧬. ChatNT can be simply prompted with a question and a nucleotide sequence to solve DNA, RNA and Protein tasks 🧑‍🔬! 📚Paper: tinyurl.com/chatNT-pdf 🌐Blog: tinyurl.com/chatNT-blog

ChatNT: A Multimodal Conversational Agent for DNA, RNA and Protein Tasks instadeep.com/wp-content/upl…

Our work on the development of a #DNA Large Language Model trained on genomes from various plants, #AgroNT, is now published in Communications Biology nature.com/articles/s4200…

A DNA-based large language model, AgroNT, trained on multiple plant genomes, can accurately predict various molecular phenotypes within plant species, including important crops. InstaDeep Javier Mendoza-Revilla Thomas Pierrot Marie Lopez doi.org/10.1038/s42003…

🌱 As scientists wrestled with the mysteries of plant genomics, our #AI problem solvers had a daring question, "Can AI make a difference?" nature covered how our #research and AI #genomics teams teamed up to search for an answer, with AgroNT – our new #LLM. 📚Read more→

We were invited to write a review article on DNA/genomic language models (gLMs). We took this occasion to gather our thoughts on promising applications, and major considerations for developing and evaluating gLMs. Pls share with your colleagues: Preprint: arxiv.org/abs/2407.11435

Nucleotide Transformer is a series of genomics foundation models of different parameter sizes and training datasets which can be applied to various downstream tasks by fine-tuning. InstaDeep nature.com/articles/s4159…