🔥The 9th Round of Easy Loan, Earn $40 Reward is in progress❗️ ⏰ Promotion Period: January 15th - Feburary 15th, 2025 👉 Register now and check more details at gate.io/campaigns/358

Great to see this out! A fantastic collaboration with the one-and-only David Lara-Astiaso plus Ainhoa Goñi-Salaverri, Julen M, Jake P. Taylor-King, and Brian Huntly (Cambridge Stem Cell Institute). CRISPR-screens of chromatin factors in hematopoiesis - let's go! doi.org/10.1038/s41588…

Thrilled to share my work on Nature Genetics. It's not just TFs! A lineage dependency map for chromatin factors in hematopoiesis. Great mentorship by Brian Huntly and awesome collaboration with Nikolaus Fortelny. With Julen M, Nisha Narayan Jake P. Taylor-King. nature.com/articles/s4158…

🚨Centre for Genomic Regulation (CRG) is a great place to work. The Genome Biology Program is excellent. 😃 Join us! 👇🏻 recruitment.crg.eu/content/jobs/p… Friends, please, retweet 🔄

Tools and papers I found useful this past week: #AI #genomics #singlecell 👇🧵

🚨🚨Dear friends! We have two openings in the lab!! Postdoc in 3D modeling👉🏻 cnag.eu/jobs/postdoc-s… Front-End developer 👉🏻 cnag.eu/jobs/front-end… Please, retweet 🔄 Join us!!! 😁

GeNNius: An ultrafast drug-target interaction inference method based on graph neural networks academic.oup.com/bioinformatics…

You can now get my book in Spanish! ¡¡¡TRIPLE BAM!!! statquest.org/statquest-stor…

Our paper on the ancestral genome-assisted TE annotation method/resource is out in Cell Genomics! Enhanced annotation is now available for multiple species, including human and mouse, with ~70% increase in ancient TEs. cell.com/cell-genomics/…

A great review on the potential of #Transposons as therapeutic targets for #cancer. #Genomics #Bioinformatics Towards targeting transposable elements for cancer therapy nature.com/articles/s4156…

⭐️ Checkout this upcoming conference on “Genome Regulation and Cellular Fates in Homeostasis and Disease” in Madrid, 13-14 May. Superb line up of speakers on a wide range of topics! Organized by Fundación ”la Caixa” Centre for Genomic Regulation (CRG) & Cambridge University haem.cam.ac.uk/events/genome-… #Genomics #Cancer

El patrimonio no se vende NUNCA. Se tiene, se mantiene, se hace crecer. Luego, se pide prestado contra él. Pero al final tendrás que vender, no? No, nunca.🙅

1/n: 🔬We introduce NicheCompass (NC) a graph learning model to build spatial atlases across millions of cells, quantitatively characterize cell niches, infer cellular communication, and map new data into these atlases. NC can be used with various spatial technologies, ranging

Our work on Snhg11 brain function is out! We delineate the critical role of this lncRNA in the hippocampus and its contribution to Down syndrome's cognitive deficits. Shout-out to all the coauthors, Mara Dierssen lab members and colleagues at Centre for Genomic Regulation (CRG) nature.com/articles/s4138…

CODA was used to map the 3D cellular architecture of fetal rhesus macaque kidneys More here: biorxiv.org/content/10.110… More about CODA: nature.com/articles/s4159…

Excited to share the first spatially resolved multiomics atlas for human bone marrow, published today in Cell. twtr.to/cJ099. Wonderful collaborations with Ling Qin Ling Qin, Charles Nelson, Martin Carroll, Ivan Maillard, Vinohd Pillai HemepathMD labs!

Curious about the use of #DeepLearning for genomic sequences to study transcription? Check out our Annual Reviews review

You can now #AI-generate entire Juypter Notebooks for your #BioImageAnalysis tasks with the new release 0.15.0 of #biabob 🔬🖥️🗒️🎉 pip install bia-bob==0.15.0 As usual, feedback 💚ly welcome! github.com/haesleinhuepf/…

We are hiring #postdoc #compbio #MathBio #bioinfo! If you are interested in #3Dgenome, #multiomicsintegration, and developing cutting-edge approaches, join my group! 💻🧬🔬 For more info, feel free to DM or visit farabellalab.org. Please RT! IIT Armenise Harvard Foundation

Interested in 3' UTR changes in scRNA-seq? Check out our: * CPA-Perturb-seq paper * UCSC Perturb-seq tracks (see who regulates your favorite 3’ UTR!) * Seurat extension for polyA site analysis (PASTA) * Deep neural perturbation network (APARENT-Perturb) cell.com/cell/fulltext/…

We just released the final two courses of AI Python for Beginners! The complete set of four courses is now available and remains free for a limited time. They teach how to write code (a) Using AI-assistance, which is where the field is going, and (b) to take advantage of