🔥The 9th Round of Easy Loan, Earn $40 Reward is in progress❗️ ⏰ Promotion Period: January 15th - Feburary 15th, 2025 👉 Register now and check more details at gate.io/campaigns/358

📣 The much-revised manuscript of LIANA+, our all-in-one solution to study cell-cell communication from single-cell, spatial, and multi-omics technologies, is now published in Nature Cell Biology nature.com/articles/s4155…

Looking for a PhD? Take a look at EMBL programme. Among many cool projects, we are recruiting EMBL-EBI, including one position to study host-microbiome interactions in the gut, an European Research Council (ERC) project w Stefania Giacomello Ejv Zeller Group

Still time until 15th September to submit an abstract to join us in Berlin in the European Society for Spatial Biology conference 👇

Check the latest DREAMchallenges paper, evaluating methods to deconvolve cellular composition from bulk gene expression, with contributions from our (former) Alberto Valdeolivas & Julio Saez-Rodriguez 👇

Postdoc Opportunity. Join the Saez Rodriguez group! Develop computational methods to explore cellular organization & disease mechanisms using multi-omic data. #Postdoc embl.org/jobs/position/…

🚨Closing soon: ESPOD fellowships in collaboration with Wellcome Sanger Institute - the perfect opportunity to combine experimental & computational approaches for cutting-edge life science research! 🗓️Deadline 29 September Explore funding, themes and timelines👇 ebi.ac.uk/research/postd…

Post-doc opening to join our lab EMBL-EBI #EMBLEBIresearch to develop/apply #bioinformatics methods to study cellular organization, int/extra cell networks to extract disease mechanisms from sc and spatial multiomic data, with Yvan Saeys, supp by Chan Zuckerberg Initiative 👇embl.org/jobs/position/…

🫀Check out our new study on fibrosis in HFpEF, a result of great team effort with the Leuschner Lab #heart

👉Consider joining us for a post-doc at EMBL-EBI & AstraZenecaUK as part of the EAZPOD program to study multicellular mechanisms associated with #cancer treatment resistance! #postdoc ebi.ac.uk/research/postd…

Are you a student in France studying computer science, statistics, or bioinformatics? French Embassy UK🇫🇷🇪🇺 has opened a new round of internships hosted at EMBL-EBI. Find out more and apply. ebi.ac.uk/about/jobs/int…

Kidney fibrosis as a molecular process is poorly understood. In this new study together w/ Pepperkok lab @EMBL, we present a time-resolved #multiomics + computational network modeling approach in combination w/ phenotypic assays to study #kidneyfibrosis tinyurl.com/multiomicsCKD

How good is our understanding of signaling pathways? In this study together w/ Savitski Lab @EMBL, we combine multiple state-of-the-art resources to evaluate signaling pathway inference using phosphoproteomics and kinase-substrate networks tinyurl.com/2n43jsc4

We're hiring! Join Saez-Rodriguez Group as a Staff Bioinformatician at Heidelberg University- Work on multi-omics data in heart disease research (CRC 1550). PhD in computational biology or relevant experience required. 📅 Apply by Nov 18, 2024. tinyurl.com/bddyht5s

We're also hiring a Research Software Developer. Join us to redesign OmniPath and work with Postgres, Python, TypeScript & more) in systems biomedicine. PhD or relevant experience in engineering, CS, or computational bio required. Apply by Nov 18, 2024. tinyurl.com/mwjm56xk

📢 Introducing CORNETO: a unified, knowledge-driven framework for multi-sample network learning & modeling via constrained optimization, supporting a wide variety of network methods and prior knowledge 💻Code: github.com/saezlab/corneto 📜Paper: doi.org/10.1101/2024.1… 🧵👇

Our work with Lucas Schirmer in multiple sclerosis (MS) is out today in Nature Neuroscience. We investigated lesion progression and cell-cell communication events in MS using snRNA-seq and spatial transcriptomics 🧠 See below ⬇️ nature.com/articles/s4159…

Welcome Tim Coorens to EMBL-EBI ! Looking forward to working together; Tim is hiring postdocs 👇 #emblebiresearch

What are the key disrupted multicellular processes in heart failure? In our new work we combine 23 years of molecular data with recent single-cell atlases to draw a cross-study patient map. How did we navigate the heart failure space? 🧵⬇️ doi.org/10.1101/2024.1…

We present NetworkCommons, a unified platform 🪐 for network biology, providing access to omics data, knowledge, and contextualization methods, all with a consistent API 👇 Paper: doi.org/10.1101/2024.1… Docs: networkcommons.readthedocs.io

Congrats to Teichlab Human Cell Atlas We are happy to have contributed a bit to gutcellatlas.org, improving robustness of scAutoQC @slobentanzer, & cell-cell communication analyses @DanielBDimitrov with LIANA+ (liana-py.readthedocs.io), supervised by @juliosaezrod