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Simultaneous single-cell sequencing of RNA and DNA at scale with DEFND-seq nature.com/articles/s4157…

Gfi1 controls the formation of effector-like CD8+ T cells during chronic infection and cancer nature.com/articles/s4146… Nature Communications

GFI1-driven transcriptional and epigenetic programs maintain CD8+ T cell stemness and persistence Nature Immunology nature.com/articles/s4159…

I was looking for a way to display the international collaboration of my papers but couldn't find something. So here's a little python script to do it using stats extracted from scopus/scival! github.com/tuonglab/colla…

Clonal tracing with somatic epimutations reveals dynamics of blood ageing nature Alejo Rodriguez-Fraticelli, PhD Indranil Singh nature.com/articles/s4158…

Data standards for single‐cell RNA‐sequencing of paediatric cancer - Xu - 2025 - Clinical & Translational Immunology - Wiley Online Library onlinelibrary.wiley.com/doi/10.1002/ct…

SUM-seq out Nature Methods! 🚀 Ultra-high-throughput Multiplexed snATAC+RNA Used to: ⏳ link temporal macrophage GRNs to immune disease genetics 🩸 map T cell regulatory landscapes 🧬✂️ dissect TF function in hiPSC differentiation via CRISPRi/a screens doi.org/10.1038/s41592… 🧵

Thrilled to see #SAVANA out in Nature Methods🥳 SAVANA detects haplotype-resolved somatic SVs and copy number aberrations (SCNAs) and infers tumour purity & ploidy in clinical samples using long-read sequencing with or WITHOUT a matched germline control 👇nature.com/articles/s4159…

We have a PhD position opening for Australian domestic students interested to work at the intersection of immunology, data science, and paediatrics! Check out the full description here! linkedin.com/posts/ian-fraz… Di Yu 余迪

At #HCA2025GM, very happy to re-connect with old and new colleagues! Muzlifah Haniffa Teichlab

Chili crab experience with Daniyal Jafree in Singapore :)

🔎 We’re back with another MiLaboratories Research Spotlight! Enabling next-generation engineered TCR-T therapies based on high-throughput TCR discovery from diagnostic tumor biopsies Neogene, an AstraZeneca company, has developed a new TCR discovery platform - a step forward

The T cell subsetting challenge dlvr.it/TLNzXx #immunology

1st paper out as the senior author, fittingly it is the revamped scRepertoire: building a more comprehensive and efficient single-cell immune profiling ecosystem!! Large thanks to my co-authors KelvinTuong and others Paper: journals.plos.org/ploscompbiol/a… Repo: github.com/BorchLab/scRep…

An atlas of the cellular and molecular landscape of the juvenile idiopathic arthritis synovium defines tissue niches associated with disease severity Science Translational Medicine science.org/doi/10.1126/sc… Lucy Wedderburn chrissyb

I'm thrilled to share our new study out in Nature Medicine! We show that a blood test can estimate how aged or youthful one’s organs are and that these organ ages predict future disease and lifespan. Final paper from my PhD in the Tony Wyss-Coray lab. 🧵1/12 🔗 nature.com/articles/s4159…

Weight loss improves health. What happens to cells in the fat during weight loss? Intriguingly, immune cell numbers decrease but their activated states persist w chronic inflammatory potential. Beautiful work from neighbors lab Will Scott and colleagues: nature.com/articles/s4158…

Excited to share a milestone published in Nature Medicine from our decade-long effort to build The Human Phenotype Project, a unique longitudinal cohort with unmatched depth of clinical and multi-omic profiling, enabling truly predictive, personalized medicine. Led together with