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David Goggins impacttheory.com/episode/david-…

Are you developing mathematical models of biological processes? Not sure about the values to use for your rate laws? Try our new parameter search: ebi.ac.uk/biomodels/para…. Feedback welcome: [email protected]

#100DaysOfCode R188: Updating my dotfiles

It's 6am and I'm not up because I'm lazy. #sleepingin

Costless metabolic secretions as drivers of interspecies interactions in microbial ecosystems - in Nature Communications from Daniel Segrè "2 million pairwise growth simulations of 24 species in a combinatorial assortment of environments" nature.com/articles/s4146…

Superb article by Antoine Danchin, Víctor de Lorenzo et al. in #Microbial #Biotechnology: molecular Maxwell's Demons (probably not as cute as the one pictured) govern cell processes · HUGE impact on #SynBio and #Metabolic #Engineering: it's all about #thermodynamics and information!

Three good reasons to use black-box AI systems: science.sciencemag.org/content/364/64…

The Tim Ferriss Show | Neil Gaiman — The Interview I've Waited 20 Years ... youtu.be/iHPKTby9z6o via YouTube

We just released v1.0 of cayenne, our Python package for stochastic simulations! Read on to find out if you should model your system as a stochastic process, and why you should try out cayenne medium.com/heuro-labs/cay…

Check out our new preprint: Introducing and benchmarking the accuracy of cayenne: a Python package for stochastic simulations biorxiv.org/content/10.110…

Our preprint on how "mere" sequence neighbourhoods (mutational "context") can reliably predict pathogenic mutations in cancer genomes is now available via bioRxiv -- very interesting work with Balaraman Ravindran and Shayantan Banerjee at IBSE RBC-DSAI@IITM!

The NFT market has grown, As eight-figure auctions have shown. The overall price is A worse climate crisis For art you pretend that you own.

The things you take pride in are the same things you are likely to be biased about. How might the things you take pride in be misleading you? The tighter you cling to your current identity, the harder it becomes to grow beyond it.

Really delighted to announce my upcoming textbook An Introduction to Computational Systems Biology "An Introduction to Computational Systems Biology: Systems-level Modelling of Cellular Networks" by Routledge Books (Taylor&Francis) routledge.com/An-Introductio… #SystemsBiology Department of Biotechnology IIT Madras IBSE RBC-DSAI@IITM IIT Madras

I’m interviewing the first guest for the Huberman Lab Podcast tomorrow. If anyone can guess who it is, Costello will send you one of our lab hoodies.

All these discussions have now coalesced in this perspective piece where along with Dileep Kishore, we argue that the #microbialecology community has a lot to gain from considering #FAIR practices in reporting and sharing microbial interaction data. doi.org/10.1128/msyste… 7/12

Growing datasets of #microbial_interactions have enormous potential to advance integrative #microbiome research. Let's increase it using #FAIR principles and #OpenData. A nice collab with Alan Pacheco Dileep Kishore Daniel Segrè (1/3) doi.org/10.1128/msyste…

Growing datasets of #Microbial_Interactions have enormous potential to advance integrative #Microbiome research. ​​In this Perspective, Alan Pacheco Charlie Pauvert Dileep Kishore Daniel Segrè propose #FAIR principles for #OpenData standardization journals.asm.org/doi/10.1128/ms…