Lars Barquist (@lbarquist) 's Twitter Profile
Lars Barquist

@lbarquist

Assistant Prof @UofT, research group leader @Helmholtz_HIRI. Pathogen systems biology / informatics / functional genomics. Coastal New Hampshirite. Drink Moxie.

ID: 784703255427284993

linkhttps://scholar.google.com/citations?hl=en&user=9MYn5q8AAAAJ&view_op=list_works&sortby=pubdate calendar_today08-10-2016 10:33:30

2,2K Tweet

1,1K Followers

2,2K Following

Chuan Wang (@chuanwa01747380) 's Twitter Profile Photo

Happy to share our latest work published in PNASNews In collaboration with Yanjie Chao , we uncovered an RNase III-processed sRNA, ManS, that orchestrates sialic acid metabolism in Salmonella enterica during gut colonization. Link: doi.org/10.1073/pnas.2…

Happy to share our latest work published in <a href="/PNASNews/">PNASNews</a> In collaboration with <a href="/yanjiechao/">Yanjie Chao</a> , we uncovered an RNase III-processed sRNA, ManS, that orchestrates sialic acid metabolism in Salmonella enterica during gut colonization.

Link: doi.org/10.1073/pnas.2…
Lars Barquist (@lbarquist) 's Twitter Profile Photo

Interested in predicting AMR in bacteria? We show ignoring phylogenetic structure in genome collections leads to overly optimistic evaluations of machine learning methods for AMR prediction. With Yanying Yu and Nicole Wheeler. biorxiv.org/content/10.110…

Paperpile (@paperpile) 's Twitter Profile Photo

When you find a key paper, the last thing you want is to miss related studies that could strengthen your literature review. Connected Papers can help you uncover related research. You can now save references discovered in Connected Papers directly to Paperpile. Learn more in

Lars Barquist (@lbarquist) 's Twitter Profile Photo

Interested in collecting, sharing, and interacting with large collections of bacterial functional genomics data (RNA-seq, Tn-seq/TraDIS, etc.)? Check out our new web platform, Micromix, with case studies for Salmonella and Bacteroides! Thread 1/n academic.oup.com/gigascience/ar…

Anton Petrov (@antonipetrov) 's Twitter Profile Photo

🚀 New Paper Alert! 🚀 𝐑𝟐𝐃𝐓: a comprehensive platform for visualising RNA secondary structure Check it out in Nucleic Acids Res: academic.oup.com/nar/article/53… Here’s why you should give it a try 🧵👇

🚀 New Paper Alert! 🚀

𝐑𝟐𝐃𝐓: a comprehensive platform for visualising RNA secondary structure

Check it out in <a href="/NAR_Open/">Nucleic Acids Res</a>: 
academic.oup.com/nar/article/53…

Here’s why you should give it a try 🧵👇
Mikael Skurnik (@skurnikmikael) 's Twitter Profile Photo

I am happy to tell that our collaborative review article on #PhageTherapy has been just published in Nature Reviews Methods Primers rdcu.be/d9H92

GigaScience (@gigascience) 's Twitter Profile Photo

Presenting a new flexible web platform for sharing and integrating microbial omics data, including RNA-seq and transposon-insertion sequencing. Micromix: web infrastructure for visualizing and remixing microbial ‘omics data doi.org/10.1093/gigasc…

Presenting a new flexible web platform for sharing and integrating microbial omics  data, including RNA-seq and transposon-insertion sequencing.

Micromix: web infrastructure for visualizing and remixing microbial ‘omics data doi.org/10.1093/gigasc…
Lars Barquist (@lbarquist) 's Twitter Profile Photo

Very excited about our latest combining advanced cell culture, transposon-insertion sequencing, and statistical modeling to map Shigella virulence determinants in organoid models. Great collaboration w/ Maria Letizia Di Martino Sellin Lab, out in Nature Genetics nature.com/articles/s4158…

Waggoner Lab (@labwaggoner) 's Twitter Profile Photo

Large-scale organoid models, combined with genome-wide mutagenesis screening, reveals virulence factors required for Shigella colonization Maria Letizia Di Martino Nature Genetics Sellin Lab Lars Barquist nature.com/articles/s4158… nature.com/articles/s4158…

Large-scale organoid models, combined with genome-wide mutagenesis screening, reveals virulence factors required for Shigella colonization <a href="/dimartino_ml/">Maria Letizia Di Martino</a> <a href="/NatureGenet/">Nature Genetics</a> <a href="/SellinLab/">Sellin Lab</a> <a href="/LBarquist/">Lars Barquist</a>
nature.com/articles/s4158…
nature.com/articles/s4158…
Nature Portfolio (@natureportfolio) 's Twitter Profile Photo

A study in Nature Genetics establishes the comprehensive genome-wide map of Shigella genes required to infect human intestinal epithelium. go.nature.com/3ZySYa8

A study in <a href="/NatureGenet/">Nature Genetics</a> establishes the comprehensive genome-wide map of Shigella genes required to infect human intestinal epithelium. go.nature.com/3ZySYa8