Lonneke Scheffer, PhD🧬💻 (@lonnekescheffer) 's Twitter Profile
Lonneke Scheffer, PhD🧬💻

@lonnekescheffer

Postdoctoral researcher @ La Jolla Institute for Immunology ~ Computational Immunology ~ Developer of @immuneml

ID: 1171680671754018816

linkhttp://immuneml.uio.no calendar_today11-09-2019 07:03:57

89 Tweet

287 Followers

180 Following

Centre for Bioinformatics, University of Oslo (@unioslo_bioinfo) 's Twitter Profile Photo

A 2-year postdoc position is available at Centre for Bioinformatics, University of Oslo to contribute to the European project EOSC4Cancer, specifically for advancing cancer data analysis platforms. Job announcement: jobbnorge.no/en/available-j… Please RT and circulate to relevant candidates.

Maria Chernigovskaya (@mchernigovskaia) 's Twitter Profile Photo

(1/8)🎉A fresh preprint in which we present LIgO — a powerful tool to simulate adaptive immune receptor (AIR) and repertoire (AIRR) data for the development and benchmarking of AIRR-based ML 🧵⬇️ biorxiv.org/content/10.110…

(1/8)🎉A fresh preprint in which we present LIgO — a powerful tool to simulate adaptive immune receptor (AIR) and repertoire (AIRR) data for the development and benchmarking of AIRR-based ML 🧵⬇️
biorxiv.org/content/10.110…
Ivar Grytten (@ivargrytten) 's Twitter Profile Photo

KAGE2 is out! Enables very fast and accurate genotyping of structural variants using pangenomes: biorxiv.org/content/10.110…. I’ve spent the last 6+ months going deep into the SV rabbit hole, and had some surprises I thought it’s worth to also share (1/6)

Geir Kjetil Sandve (@sandvegeir) 's Twitter Profile Photo

It took us some time to chew on this, and a bunch of (intriguing) nuances came up as we dug deeper, but I think it landed as a quite accessible and useful overview of concerns and opportunities connected to causality and study design for biomarkers! (with AIRR as case)

Denis Wirtz (@deniswirtz) 's Twitter Profile Photo

UPDATED: We have identified 492 funding opportunities for early-career researchers/faculty. Download for free the database here: research.jhu.edu/rdt/funding-op… For each entry, we provide description, deadline, $ amount, eligibility, link to funder.

UPDATED: We have identified 492 funding opportunities for early-career researchers/faculty.

Download for free the database here: research.jhu.edu/rdt/funding-op…

For each entry, we provide description, deadline, $ amount, eligibility, link to funder.
Biology+AI Daily (@biologyaidaily) 's Twitter Profile Photo

Predictability of antigen binding based on short motifs in the antibody CDRH3 @BriefingBioinfo • This study demonstrates that short motifs in the antibody CDRH3 region can be predictive of antigen binding, addressing a key question in adaptive immunology. • Researchers

Predictability of antigen binding based on short motifs in the antibody CDRH3 @BriefingBioinfo 

• This study demonstrates that short motifs in the antibody CDRH3 region can be predictive of antigen binding, addressing a key question in adaptive immunology.

• Researchers
Lonneke Scheffer, PhD🧬💻 (@lonnekescheffer) 's Twitter Profile Photo

In preparation for #AAI #immunology2025 I’ve designed these super cute labels for #mAcademia nuts - thanks Peters lab for helping out with the labelling! Visit booths #535 & #537 to get your hands on them & learn more about Immune Epitope Database Cancer Epitope Database & Analysis Resource HIPC AIRR Knowledge Commons (AKC)

In preparation for #AAI #immunology2025 I’ve designed these super cute labels for #mAcademia nuts - thanks Peters lab for helping out with the labelling!
Visit booths #535 &amp; #537 to get your hands on them &amp; learn more about <a href="/iedb_/">Immune Epitope Database</a> <a href="/CEDAR_epitopes/">Cancer Epitope Database & Analysis Resource</a> <a href="/hipcProject/">HIPC</a> <a href="/AIRR_Knowledge/">AIRR Knowledge Commons (AKC)</a>