MarigortaLab (@marigortalab) 's Twitter Profile
MarigortaLab

@marigortalab

Integrative Genomics Lab (CIC bioGUNE). Ikerbasque. RyC.
In love with evolution, genomics and phenotypes
Sometimes epistatically, tweets by Urko M. Marigorta

ID: 1157036132942712832

linkhttps://www.cicbiogune.es/people/umartinez calendar_today01-08-2019 21:11:25

3,3K Tweet

560 Followers

363 Following

MarigortaLab (@marigortalab) 's Twitter Profile Photo

Assessment of a Polygenic Risk Score in Screening for Prostate Cancer ▶️Targeted screening for men in top 10% of genetic risk (as we can currently measure!) ▶️ 40% had cancer, >50% needed treatment ▶️ 70% missed by current screening guidelines 😠 nejm.org/doi/full/10.10…

Eduard Porta (@eportacangen) 's Twitter Profile Photo

Finally out at Cell, our latest contribution to proteogenomics with #CPTAC The impact of germline variants to the cancer proteome As always, super fun and exciting to work with The Ding Lab Matt Bailey, and this time even with MarigortaLab cell.com/cell/fulltext/…

MarigortaLab (@marigortalab) 's Twitter Profile Photo

Recent T1D cases might be showing lower PRS: ▶️diagnosing less "genetic" cases? ▶️changes in genetic architecture due to "new" risk alleles (likely amplification due to GxE)? ▶️changes in disease subtypes? Gotta think about it! 🤔 #T1D #genomics #PRS link.springer.com/article/10.100…

MarigortaLab (@marigortalab) 's Twitter Profile Photo

Polygenic risk score for BMI does not associate with weight loss from GLP1 drugs or bariatric surgery. ▶️Treatment works equally regardlesss of "genetics"? ▶️Genetics of susceptibility ain't genetics of response? nature.com/articles/s4159…

MarigortaLab (@marigortalab) 's Twitter Profile Photo

Just learned about p-Tau217 in blood as a potential biomarker to Alzheimer’s 15 years before symptoms 😯 erictopol.substack.com/p/the-breakthr…

MarigortaLab (@marigortalab) 's Twitter Profile Photo

Epic modeling of the proposed 4 stages of IBD epidemic ➡️Now we can assign stages from incidence/prev data ➡ Reinforces we gotta stop new cases from appearing, specially in places moving to stage 2 ➡️ Health justice angle: lack of data blinds us a lot! nature.com/articles/s4158…

Epic modeling of the proposed 4 stages of IBD epidemic
➡️Now we can assign stages from incidence/prev data
 ➡ Reinforces we gotta stop new cases from appearing, specially in places moving to stage 2
➡️ Health justice angle: lack of data blinds us a lot!
nature.com/articles/s4158…
MarigortaLab (@marigortalab) 's Twitter Profile Photo

Cool study of response eQTLs 👇 ➡️Immune stimulation with bacterial, viral and adaptive triggers ➡️>55% are seen after stimulation ➡ Most are context-specific eQTL (even with opposite direction), but some due to gene expr. induced (or lost!) journals.plos.org/plosgenetics/a…

Cool study of response eQTLs 👇
➡️Immune stimulation with bacterial, viral and adaptive triggers
➡️>55% are seen after stimulation
 ➡ Most are context-specific eQTL (even with opposite direction), but some due to gene expr. induced (or lost!)
journals.plos.org/plosgenetics/a…
CIC bioGUNE (@cicbiogune) 's Twitter Profile Photo

#bioGUNE_Thesis | Researcher Adrián Gaite Reguero will defend his #PhD thesis: 📖 “Characterization of the molecular pathways that drive genetic risk in inflammatory bowel disease” 👤 Urko M. Marigorta MarigortaLab 🔗 ow.ly/GIJK50VQSUq 🕜 Thursday, May 15th, 10:30H

#bioGUNE_Thesis | Researcher Adrián Gaite Reguero will defend his #PhD thesis:

📖 “Characterization of the molecular pathways that drive genetic risk in inflammatory bowel disease”
👤 Urko M. Marigorta <a href="/MarigortaLab/">MarigortaLab</a>
🔗 ow.ly/GIJK50VQSUq
🕜 Thursday, May 15th, 10:30H
Iago Rodriguez-Lago (@iagorlago) 's Twitter Profile Photo

So excited to share the publication of the protocol from the EARLY cohort from GETECCU 🙋350 patients 🏥25 sites 🔬Incidental IBD 🧪💩Multi-omics ⏰10 years f-u Manuel Barreiro MarigortaLab Beatriz Mateos More details 👇 journals.sagepub.com/doi/10.1177/17…

Alex Strudwick Young (@alextisyoung) 's Twitter Profile Photo

In March last year, at the age of 35, I was diagnosed with advanced stage III rectal cancer with a metastasis in my liver. This was a shock: I had no family history, and none of the doctors suspected it. In fact, I'd had a negative occult blood test when I went to ER with severe

In March last year, at the age of 35, I was diagnosed with advanced stage III rectal cancer with a metastasis in my liver. This was a shock: I had no family history, and none of the doctors suspected it. In fact, I'd had a negative occult blood test when I went to ER with severe
MarigortaLab (@marigortalab) 's Twitter Profile Photo

Large GWAS for T2D in East Asians, with cool comparisons vs. Europeans. Key findings: "Genetically determined insulin resistance contributes more prominently to T2D in Europeans than in East Asians". Would have loved a comparison across decades! researchsquare.com/article/rs-653…

Large GWAS for T2D in East Asians, with cool comparisons vs. Europeans.
Key findings: "Genetically determined insulin resistance contributes more prominently to T2D in Europeans than in East Asians".
Would have loved a comparison across decades!
researchsquare.com/article/rs-653…
MarigortaLab (@marigortalab) 's Twitter Profile Photo

First personalized in vivo CRISPR base editing in a human to correct a pathogenic mutation. Lovely! 😘 erictopol.substack.com/p/the-first-hu…

First personalized in vivo CRISPR base editing in a human to correct a pathogenic mutation.
Lovely! 😘
erictopol.substack.com/p/the-first-hu…
Iago Rodriguez-Lago (@iagorlago) 's Twitter Profile Photo

Single-cell RNAseq shows significant differences between patients with incidental Crohn's disease vs healthy controls Just published our collaborative study with MarigortaLab CIC bioGUNE Manuel Barreiro OSIBarru-GaldakaoESI frontiersin.org/journals/immun…

MarigortaLab (@marigortalab) 's Twitter Profile Photo

▶️Assortative mating induces long-range weak LD ▶️It could explain 20 to 40% of SNP heritability for social traits! ❓Crazy idea: could we focus on specific haplotypes to infer ancestral differences in social structure? (eg. Yamnaya vs. Early Farmers)? nature.com/articles/s4158…

MarigortaLab (@marigortalab) 's Twitter Profile Photo

Stratify healthy people before disease strikes? Our new paper 👇 ➡️Multiomic > single-omic for stratification ➡️One cluster shows stable (and silent!) molecular risk with no symptoms, across 3 visits ➡️Clusters mirror routine labs: omics for the clinic? rdcu.be/ekvYk

Stratify healthy people before disease strikes?
Our new paper 👇
➡️Multiomic &gt; single-omic for stratification
➡️One cluster shows stable (and silent!) molecular risk with no symptoms, across 3 visits
➡️Clusters mirror routine labs: omics for the clinic?
rdcu.be/ekvYk
Andrea ganna (@andganna) 's Twitter Profile Photo

Matteo Ferro, a doctoral candidate in my team has a new blog on health data science where he is collecting the most interesting papers, each month. Check it out! healthdatascience.substack.com

euan ashley (@euanashley) 's Twitter Profile Photo

Atul Butte died yesterday. The world lost a giant. A big bear of a man. With a huge smile. With love for everyone. With energy that could power a room. I loved everything about Atul. I loved how he was always happy. I loved how excited he was about science and helping people.

Atul Butte died yesterday.
The world lost a giant.
A big bear of a man.
With a huge smile.
With love for everyone.
With energy that could power a room.
I loved everything about Atul.
I loved how he was always happy.
I loved how excited he was about science and helping people.
CIC bioGUNE (@cicbiogune) 's Twitter Profile Photo

🔬 #bioGUNE_Research | #CICbioGUNE BRTA - Basque Research and Technology Alliance advances preventive medicine by combining multi-omic data and bioinformatics The study uncovers early molecular risk signals, showcasing the power of local precision medicine in a Basque cohort 🔗 ow.ly/9IWr50WbmCT

🔬 #bioGUNE_Research | #CICbioGUNE <a href="/brta_eus/">BRTA - Basque Research and Technology Alliance</a> advances preventive medicine by combining multi-omic data and bioinformatics

The study uncovers early molecular risk signals, showcasing the power of local precision medicine in a Basque cohort

🔗 ow.ly/9IWr50WbmCT
Marios Georgakis (@mariosgeorgakis) 's Twitter Profile Photo

Massive investments in proteomics at population level: 👉UK Biobank now fully funded to proceed with 600K samples (500K baseline + 100k follow-up) with Olink Explore HT 👉Geisinger proteomics project to quantify 200K samples also with Olink Explore HT

Massive investments in proteomics at population level:
👉UK Biobank now fully funded to proceed with 600K samples (500K baseline + 100k follow-up) with Olink Explore HT
👉Geisinger proteomics project to quantify 200K samples also with Olink Explore HT
Min Seo Kim, MD, MSDH (@minseokim_md) 's Twitter Profile Photo

Delighted to share the preprint on the largest obesity GWAS to date! GWAS from >2 million participants Key: ✳️13% increase in loci discovery ✳️Identified 11 obesity genetic clusters (endotypes) ✳️Obesity management should be as diverse as the condition itself Thread👇

Delighted to share the preprint on the largest obesity GWAS to date!

GWAS from &gt;2 million participants

Key:
✳️13% increase in loci discovery 
✳️Identified 11 obesity genetic clusters (endotypes) 
✳️Obesity management should be as diverse as the condition itself

Thread👇