Nikolay Oskolkov (@nikolayoskolkov) 's Twitter Profile
Nikolay Oskolkov

@nikolayoskolkov

Bioinformatician at Lund University, NBIS SciLifeLab, Sweden. PhD in theoretical physics. Interested in computational biology, statistics and machine learning

ID: 1116771275295350786

linkhttps://nikolay-oskolkov.com calendar_today12-04-2019 18:33:15

773 Tweet

1,1K Followers

392 Following

SPAAM-community (@spaam_community) 's Twitter Profile Photo

#MetagenomicsMonday🧬Pseudogymnoascus fungi found in Ötzi’s gut! An accidental ingestion? pmc.ncbi.nlm.nih.gov/articles/PMC11…

Colossal Biosciences® (@colossal) 's Twitter Profile Photo

The world’s first de-extincted animals, dire wolf brothers Romulus and Remus, were born on October 1, 2024. They are best buds, growing stronger every day, and they live together on a secure, expansive ecological preserve. And while they’re BFFs, they are being socialized with

Nikolay Oskolkov (@nikolayoskolkov) 's Twitter Profile Photo

If you use Kraken for profiling microbial/environmental/ancient metagenomic data, check this preprint where I benchmark filtering strategies of Kraken output on simulated microbial and environmental metagenomic samples, and provide recommendations for optimal filtering thresholds

If you use Kraken for profiling microbial/environmental/ancient metagenomic data, check this preprint where I benchmark filtering strategies of Kraken output on simulated microbial and environmental metagenomic samples, and provide recommendations for optimal filtering thresholds
EPICconference (@epicconference) 's Twitter Profile Photo

Are you an evolutionary/population geneticist in Denmark? The EPIC conference is back and it will take place on 11-12 August 2025 in Aarhus. Come along for two days of great talks and networking! #EPICdk25 Hosts: Molekylærbiologi - Molecular Biology & Population and Statistical Genetics Group at UCPH Register now at: popgen.dk/epic/

Are you an evolutionary/population geneticist in Denmark? The EPIC conference is back and it will take place on 11-12 August 2025 in Aarhus. Come along for two days of great talks and networking! #EPICdk25 

Hosts: <a href="/MolBiolAU/">Molekylærbiologi - Molecular Biology</a> &amp; <a href="/PopGenDK/">Population and Statistical Genetics Group at UCPH</a>
Register now at: popgen.dk/epic/
Physalia-courses@ONLINE (@physacourses) 's Twitter Profile Photo

This course offers a deep dive into the unique challenges and computational methods used for analyzing ancient microbial, animal, and plant DNA — with a focus on practical implementation using the aMeta workflow. physalia-courses.org/courses-worksh… with Nikolay Oskolkov

Physalia-courses@ONLINE (@physacourses) 's Twitter Profile Photo

🚨 Course Alert 🚨 Registrations are now OPEN for the Environmental Metagenomics course this October! 🧬 Join us with Nikolay Oskolkov & Samuel Aroney for a deep dive into the environmental metagenomics world Oxford Nanopore PacBio

🚨 Course Alert 🚨
Registrations are now OPEN for the Environmental Metagenomics course this October! 🧬 
 Join us with <a href="/NikolayOskolkov/">Nikolay Oskolkov</a> &amp; <a href="/aroney_samuel/">Samuel Aroney</a> for a deep dive into the environmental metagenomics world
<a href="/nanopore/">Oxford Nanopore</a> <a href="/PacBio/">PacBio</a>
Physalia-courses@ONLINE (@physacourses) 's Twitter Profile Photo

Registration is now open for the course "AI for Genomics: From CNNs and LSTMs to Transformers" with Nikolay Oskolkov Explore how modern AI architectures—CNNs, LSTMs & Transformers—can be applied to genomics through hands-on coding sessions physalia-courses.org/courses-worksh…

Mary ThePeople (@maria_lopopolo) 's Twitter Profile Photo

Did leprosy exist in the Americas before European invasion? Our lab #aDNA study supervised by Nico Rascovan with Dr Charlotte Avanzi (CSU) finds M.lepromatosis in pre-colonial Ancestors from North and South America. science.org/doi/10.1126/sc…

Physalia-courses@ONLINE (@physacourses) 's Twitter Profile Photo

We’ve just kicked off the 2nd edition of our Machine Learning for Multi-Omics Integration course w/ Nikolay Oskolkov & a group of attendees from all over the globe! 🌍 We’ll explore machine learning methods for integrating large and complex biological datasets 🚀

We’ve just kicked off the 2nd edition of our Machine Learning for Multi-Omics Integration course w/ <a href="/NikolayOskolkov/">Nikolay Oskolkov</a> &amp; a  group of attendees from all over the globe! 🌍  
We’ll explore machine learning methods for integrating large and complex biological datasets  🚀
Physalia-courses@ONLINE (@physacourses) 's Twitter Profile Photo

Huge thanks to Nikolay Oskolkov and all the participants of the 2nd edition of the Machine Learning for Multi-Omics Integration course! (We’re missing a few faces in this photo) If you want to join us for the next edition of this course, have a look at: physalia-courses.org/courses-worksh…

Huge thanks to  <a href="/NikolayOskolkov/">Nikolay Oskolkov</a> and all the participants of the 2nd edition of the Machine Learning for Multi-Omics Integration course! (We’re missing a few faces in this photo)
If you want to join us for the next edition of this course, have a look at: physalia-courses.org/courses-worksh…
Nikolay Oskolkov (@nikolayoskolkov) 's Twitter Profile Photo

Our paper on ancient infectious diseases in Eurasia is out in Nature. Congratulations Martin Sikora, Eske Willerslev and all the co-authors!

Our paper on ancient infectious diseases in Eurasia is out in Nature. Congratulations Martin Sikora, Eske Willerslev and all the co-authors!
Nikolay Oskolkov (@nikolayoskolkov) 's Twitter Profile Photo

On Monday the 14th of July 2025, 2-8 pm CET, I am running an online seminar on dimensionality reduction and clustering, everyone is welcome to join! instats.org/seminar/explor…

On Monday the 14th of July 2025, 2-8 pm CET, I am running an online  seminar on dimensionality reduction and clustering, everyone is welcome  to join! instats.org/seminar/explor…