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Do you like host micrbiome and omics based research ? Great opportunity in Pope lab for PhD and postdoc!

Use of Proteomics and Phosphoproteomics demonstrate Sachin Singh GAK and PRKCD are positive regulators of PRKN-independent mitophagy biorxiv.org/content 10.1101/2020.11.05.369496v1

Planning to perform Proximity dependent biotinylation and wondering, who can help you to perform proteomics analysis . Please contact PCF-OUS Oslo and Sachin Singh. we have good expertise in wet-lab and data analysis.

BOOST pTyr quantification

We developed a scalable, quantitative and ultra-high sensitivity workflow for true single cell proteome analysis - one by one. Single cells have a stable proteome but not transcriptome. Great collaboration with @Bruker Evosep Fabian Theis. Preprint: rb.gy/l4q32n

Very good start of new year! Good collaboration between Jorunn Stamnæs and our proteomics core facilities PCF-OUS Oslo Sachin Singh NAPI Norway

Fast Quantitative Analysis of timsTOF PASEF Data with MSFragger and IonQuant | buff.ly/2M02S1q #proteomics

We PCF-OUS Oslo are adding new BrukerMassSpec MS instrument to our PCF facility. Installation start today and we are looking forward to use it in coming weeks👏👏Sachin Singh NAPI Norway

Very productive day, installation process is much more faster than expected. Most difficult part was decide this amazing things a name. Finally, we named it Hilton II ( in-house name)NAPI Norway Sachin Singh Jrbrtsn

PCF-OUS Oslo

Read about three new BrukerMassSpec instruments just installed at the NAPI core facilities @unioslo_mn UiO - Det medisinske fakultet/Oslounivsykehus, and @UniNMBU. Exciting new investments that will benefit many projects. Thanks to Norges forskningsråd for funding. bit.ly/3jOzTKQ

It has been amazing week! PCF prepared more than 400 proteomics samples in week. We have developed high throughput sample preparations pipeline. If you want to investigate outcome of your drug or gene editing screen at protein level.  We can help you with that. Sachin Singh

Announcing the release of #FragPipe 15. Improvements in all modules, including MSFragger and IonQuant. Support for TMT, SILAC, LFQ-MBR quant, FAIMS, open PTM searches, glycoproteomics, HLA/peptidomics, spectral library building for DIA analysis, and more. fragpipe.nesvilab.org

MaxDIA is in the spotlight of Nature Methods Many thanks to Dr. Arunima Singh for this kind overview doi.org/10.1038/s41592… #proteomics Max Planck Institute of Biochemistry (MPIB) MaxQuant Nature Biotechnology

What’s the best data-independent acquisition (DIA) workflow for your proteomics experiments? Researchers tested a standard human proteins mixture with 36 workflows including 4 different DIA windows and 6 different software tools to find out. pubs.acs.org/doi/10.1021/ac…

Interested in MS based antibody analysis. Please read this Review published in collaboration with our core facility!!

Leutert et al. provide an overview of the basic modes of #PTM crosstalk, the proteomic methods to elucidate PTM crosstalk, and approaches that can inform about the functional consequences of #PTMcrosstalk ― University of Washington Mario Leutert Judit Villen Sam Entwisle mcponline.org/article/S1535-…

How can you predict kinase activity in phosphoproteomic data? This database allows you to do this, even for poorly annotated kinases. Read more in this new paper: doi.org/10.1021/acs.jp…”

Please read this nice article from Christopher Carroll and collaboration with PCF-OUS Oslo NAPI Norway

We were keep getting more and more requests for proteomics analysis for big batch of samples so we managed to install timsTOF pro 2 at our core facility and now we are ready for more MS analysis.