Qi Qiu | 邱琦 (@qiqiu8788) 's Twitter Profile
Qi Qiu | 邱琦

@qiqiu8788

Research Associate, Wu lab @PennGenetics @PennEpiInst | working on #epigenetics & #singlecellgenomics | IGDB-CAS Alumni | Romans 8:28

ID: 1298470043613790208

linkhttp://wulabupenn.org calendar_today26-08-2020 03:59:44

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445 Following

Xiekui Cui (@marktransposon) 's Twitter Profile Photo

How did humans develop unique traits despite sharing nearly identical genomes with other primates like chimpanzees? Together with Han Yang (Han Yang), our new study on human accelerated regions (HARs) sheds light on this question @ nature.com/articles/s4158…. 1/12

Omer Ali Bayraktar (@bayraktar_lab) 's Twitter Profile Photo

How does tumour heterogeneity arise? How can we predict cancer cell plasticity? In 2 studies, we trace #glioblastoma heterogeneity to a spatial cancer cell trajectory w. atlassing bit.ly/4mkrWgs & predict plasticity w. snRNA/ATAC+deep learning bit.ly/3FbI6Ic 🧵

How does tumour heterogeneity arise? How can we predict cancer cell plasticity? In 2 studies, we trace #glioblastoma heterogeneity to a spatial cancer cell trajectory w. atlassing bit.ly/4mkrWgs & predict plasticity w. snRNA/ATAC+deep learning bit.ly/3FbI6Ic 🧵
Xuyu Qian (@qianxuyu) 's Twitter Profile Photo

I'm thrilled to share that I will be starting my independent lab this winter as a tenure-track Assistant Professor at the new BRIDGE Center at Children's Hospital and Penn Medicine! Grateful for the support from mentors, collaborators, and friends—excited for what's ahead! 🧠✨

I'm thrilled to share that I will be starting my independent lab this winter as a tenure-track Assistant Professor at the new BRIDGE Center at <a href="/ChildrensPhila/">Children's Hospital</a> and <a href="/PennMedicine/">Penn Medicine</a>! Grateful for the support from mentors, collaborators, and friends—excited for what's ahead! 🧠✨
zack chiang (@z_chiang) 's Twitter Profile Photo

The peer-reviewed version of expansion in situ genome sequencing is now out in Science! The news is bittersweet – when we first revealed this last September, I never guessed it would be my final paper in academia, but a lot has changed. A few parting thoughts:

The peer-reviewed version of expansion in situ genome sequencing is now out in Science!

The news is bittersweet – when we first revealed this last September, I never guessed it would be my final paper in academia, but a lot has changed. A few parting thoughts:
Sergiu P. Pasca (@sergiu_p_pasca) 's Twitter Profile Photo

Over the past couple of weeks, several asked if I could share the individual slides summarizing our recently published framework in nature on designing experiments with #organoids, #assembloids, and transplantation. Here they are—6 slides capturing the key takeaways👇

Over the past couple of weeks, several asked if I could share the individual slides summarizing our recently published framework in <a href="/Nature/">nature</a> on designing experiments with #organoids, #assembloids, and transplantation.
Here they are—6 slides capturing the key takeaways👇
bioRxiv Genomics (@biorxiv_genomic) 's Twitter Profile Photo

Highly sensitive and scalable time-resolved RNA sequencing in single cells with scNT-seq2 biorxiv.org/content/10.110… #biorxiv_genomic

Children's Hospital (@childrensphila) 's Twitter Profile Photo

A few weeks ago we introduced you to KJ, who made medical history as the first patient to receive a personalized gene editing therapy. After almost a year at CHOP, KJ is now at home with his family. 🎓 Tune in to NBC's TODAY tomorrow morning to hear from his family!

Hani Goodarzi (@genophoria) 's Twitter Profile Photo

Been going back and forth on whether it makes sense to post science in the midst of all that is happening. But here it goes with a couple of days of delay: biorxiv.org/content/10.110…

Liu Lab (Dr. Kathy F. Liu) (@liufange) 's Twitter Profile Photo

WE ARE HIRING: Postdoc Positions! Join us at UPenn in vibrant Philly, cutting-edge science, great city, amazing team. Please share and let's get in touch!

WE ARE HIRING: Postdoc Positions!  Join us at UPenn in vibrant Philly, cutting-edge science, great city, amazing team. Please share and let's get in touch!
Ann Huang (@_annhuang) 's Twitter Profile Photo

1/12 Excited to share our team's latest work and the first @xaira_thera preprint! Here, we introduce FiCS Perturb-seq, an industrialized platform for generating scaleable, high-quality perturbation data. 📄 Read the preprint: biorxiv.org/content/10.110…

Shuibing Chen (@chenshuibing) 's Twitter Profile Photo

Happy to share the exciting news that Jeya’s paper on ChemPerturb-Seq is online J Jeya Vandana TPCB Weill Cornell Medicine Surgery Shuibing Chen Weill Cornell GSMS cell.com/cell-stem-cell… We’ve also developed an AI-powered, open-access website. Have fun. chemperturbdb.com

GonçaloCasteloBranco (@gocastelobranco) 's Twitter Profile Photo

The call just opened! ki.se/en/about-ki/jo… You can apply to several departments simultaneously, check out which depts better fit your profile! Here is the call for our Department of Medical Biochemistry and Biophysics ki.varbi.com/what:job/jobID…

Peng Hu (@penghu_xqq) 's Twitter Profile Photo

Excited to share our work in Nature Communications We benchmarked metabolic RNA labeling chemistries for time-resolved scRNA-seq, enhancing detection of new RNA during zebrafish embryogenesis. 👉 rdcu.be/eujFN Many thanks to Hao Wu | 吴昊 and Qi Qiu | 邱琦 for their unwavering support.

Chongyuan Luo (@chongyuanluo) 's Twitter Profile Photo

Congrats to Terence Li on publishing his reviewed preprint in eLife - the journal "The impact of ambient contamination on demultiplexing methods for single-nucleus multiome experiments" elifesciences.org/reviewed-prepr…

Congrats to <a href="/terencewtli/">Terence Li</a> on publishing his reviewed preprint in <a href="/eLife/">eLife - the journal</a> "The impact of ambient contamination on demultiplexing methods for single-nucleus multiome experiments" elifesciences.org/reviewed-prepr…
Nate Tippens (@ndtippens) 's Twitter Profile Photo

The discussion around virtual cell models has primarily focused on algorithms and metrics. What about the training data? Is scRNA-seq good enough? A key challenge is distinguishing direct vs indirect effects on gene expression. 1/5

Weixin Tang (@weixint) 's Twitter Profile Photo

This week we publish in Nature Biotechnology "High-precision cytosine base editors by evolving nucleic-acid-recognition hotspots in deaminase". In this work, we show that both nucleotide and context specificity of deaminases can be reprogrammed by hotspot-focused directed evolution 1/n

This week we publish in <a href="/NatureBiotech/">Nature Biotechnology</a> "High-precision cytosine base editors by evolving nucleic-acid-recognition hotspots in deaminase". In this work, we show that both nucleotide and context specificity of deaminases can be reprogrammed by hotspot-focused directed evolution 1/n
Josh Welch (@labwelch) 's Twitter Profile Photo

Our paper is now in Nature Biotechnology! Topological velocity inference from spatial transcriptomic data. TopoVelo infers the direction of differentiation/migration; quantifies spatial cell influence; and identifies morphology changes during differentiation. 🧵rdcu.be/ewqMB