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Explainable diagnostic fragments for O-glycans! A huge+diverse dataset, a bit of machine learning, and you get potent/exhaustive/generalizable rules that analysts can follow to annotate isomers & attach quantitative confidence scores to their annotation:-) biorxiv.org/content/10.110…

In our latest Nature Methods perspective we provide 7 questions on how to detect data leakage in biological #MachineLearning applications. Judith Bernett David B. Blumenthal @bit_tumcs Florian Haselbeck Roman Joeres @itisalist TU München #TUMCS #HSWT rdcu.be/dQuw1

Watch out for our new sticker at upcoming conferences:D Gotta get onto all of your laptops (or phones, I don't judge) #glycotime

I'm currently preparing a MLSB @ NeurIPS submission. So, I can totally relate 😂

Pending editorial decision

BREAKING NEWS The Royal Swedish Academy of Sciences has decided to award the 2024 #NobelPrize in Chemistry with one half to David Baker “for computational protein design” and the other half jointly to Demis Hassabis and John M. Jumper “for protein structure prediction.”

glycowork v1.4 is live! 🥳🟢🟦🟦 Development always continues but we want this to be maximally useful for the entire glyco-community, so let us know if you have a feedback (or if you want to contribute:-) ) #glycotime github.com/BojarLab/glyco…

Now, I'm wondering which path to making a move at the World Chess Championship is easier for me: 1. Mastering chess and becoming a super grandmaster or 2. Mastering my research field and becoming a Nobel Laureate

As of today also on the blue side: Roman Joeres.bsky.social

Strong opinion: The shift from topological data analysis (TDA) to topological deep learning (TDL) parallels the evolution from signal processing to deep learning, moving from feature extraction on raw data to learning hierarchical abstractions from latent representations.

The last day will be the best day NeurIPS Conference. MLSB @ NeurIPS is about to start and GIFFLAR will be presented in the poster sessions. Come for some sweets to the East Meeting Rooms 11 and 12. Poster sessions are at 11:20am and 4pm. Daniel Bojar #mlsb #NeurIPS2024 #glycotime

3 & out Lets Go #Cowboys Grüße aus Dallas ins #RTLNFL Studio Björn Werner Mitja Lafere Patrick Esume

Your correspondence finds me here pic.x.com/E5d3d9IKu3

DataSAIL is out in Nature Communications Since the preprint, we have improved the work a lot, thanks to countless reviewers and feedback. You can find it here: nature.com/articles/s4146… Thanks, David B. Blumenthal and ok, for helping and supervising me on this journey.

Curious how we can make machine learning predictions on biological data truly reliable, even when faced with unseen and dissimilar real-world scenarios?Nature Communications FAU Erlangen-Nbg "Data splitting to avoid information leakage with DataSAIL" 1. In bioinformatics, traditional random

DataSAIL got accepted as an Oral to the HelmholtzAI Conference in #Karlsruhe Check out the publication in Nature Communications: nature.com/articles/s4146… and the Git Repo: github.com/KalininaLab/Da… Thanks one more time for the great collaboration David B. Blumenthal ok Helmholtz AI

DataSAIL's "press tour" stops MLCSB ISMB/ECCB Conference in Liverpool for a talk and a poster. If you're in ML, come around and check the data splitting out. I'm looking forward to this and the keynotes by the Nobel Laureates John Jumper and David Baker! ok David B. Blumenthal