Santosh Thapa (@santoshthapa11) 's Twitter Profile
Santosh Thapa

@santoshthapa11

Postdoc @BCMHouston, former Clinical Metagenomics Fellow @TexasChildrens, @UNTHSCAlumni, From #NepalHimalaya. All things #Microbiome. Views are my own.

ID: 422531727

calendar_today27-11-2011 11:07:48

2,2K Tweet

182 Followers

357 Following

Segata Lab (@cibiocm) 's Twitter Profile Photo

📢 NEW paper is OUT: "Patients with neuroblastoma display alterations in taxonomic and functional gut microbiome composition, which cannot be traced to differential maternal seeding." For a great summary of the main highlights, DON'T MISS this thread by Mireia Valles-Colomer ⬇️

Shai Bel (@mucus_man) 's Twitter Profile Photo

But when I plotted the individual values of the expression of this gene I found that only 1 sample out of 14 actually showed any expression!! Of course this doesn't even pass a basic t test, so how can it score an adjusted p-value of 10^-9 on a DESeq2 analysis?! Please help!

But when I plotted the individual values of the expression of this gene I found that only 1 sample out of 14 actually showed any expression!! Of course this doesn't even pass a basic t test, so how can it score an adjusted p-value of 10^-9 on a DESeq2 analysis?! Please help!
Danique (@danique__mulder) 's Twitter Profile Photo

Apply for our summer course: Brain, Bacteria and Behaviour: understanding the gut-brain axis Mirjam Bloemendaal Alejandro Arias @MostertJeanette More information: ru.nl/en/about-us/ev…

Nicolas Fanget (@nfanget) 's Twitter Profile Photo

New article! Read Oral and middle ear delivery of otitis media standard of care antibiotics, but not biofilm-targeted antibodies, alter chinchilla nasopharyngeal and fecal microbiomes dlvr.it/T2HBp3 in npj Biofilms

APC Microbiome Ireland (@pharmabiotic) 's Twitter Profile Photo

When stress goes viral... A new APC paper, a collaboration from John F. Cryan lab and @colinhillucc lab out in Nature Microbiology. Led by Nate Ritz we show that the gut virome plays a key role in the modulation of the microbiota–gut–brain axis during stress rdcu.be/dxP4s

When stress goes viral... A new APC paper, a collaboration from <a href="/jfcryan/">John F. Cryan</a> lab and <a href="/colinhillucc/">@colinhillucc</a> lab out in <a href="/NatureMicrobiol/">Nature Microbiology</a>. Led by  <a href="/NateRitz3/">Nate Ritz</a> we show that the gut virome  plays a key role in the modulation of the microbiota–gut–brain axis during stress rdcu.be/dxP4s
Nate Ritz (@nateritz3) 's Twitter Profile Photo

The gut virome is associated with stress-induced changes in behaviour and immune responses in mice nature.com/articles/s4156… Excited to share our newly published study Nature Microbiology! APC Microbiome Ireland UCC Anat. & Neurosci John F. Cryan @colinhillucc image credit Emily Knox (1/6)

The gut virome is associated with stress-induced changes in behaviour and immune responses in mice
nature.com/articles/s4156…

Excited to share our newly published study <a href="/NatureMicrobiol/">Nature Microbiology</a>!

<a href="/Pharmabiotic/">APC Microbiome Ireland</a> <a href="/AnatNeuroUCC/">UCC Anat. & Neurosci</a>  <a href="/jfcryan/">John F. Cryan</a> <a href="/colinhillucc/">@colinhillucc</a> image credit <a href="/emilygknox/">Emily Knox</a> (1/6)
Henrik M. Roager (@hroager) 's Twitter Profile Photo

Congratulations Simone Zuffa, Pieter Dorrestein et al! 🚀 Happy that we could contribute to mibrobeMASST 🙏 Nature Microbiology Identification of #microbe-derived #metabolites and their producers without a priori knowledge will enhance the understanding of microbes’ role in health

Pieter Dorrestein (@pdorrestein1) 's Twitter Profile Photo

Call to the microbiome community. We are building a collaborative microbial metabolite center (CMMC) knowledgbase resource to allow direct connection of microbiome derived molecules, their producers and activities. If you have published papers and want to add your 1/

hutlab (@hutlab) 's Twitter Profile Photo

We are now accepting applications for our annual workshop on Microbial Community Multi-omics. The 2024 workshop is being held on the 3rd-7th of June in Český Krumlov, Czech Republic. Sign up below! evomics.org/2024-microbial…

Microbiome (@microbiomej) 's Twitter Profile Photo

Longitudinal multi-omics analysis uncovers the altered landscape of gut microbiota and plasma metabolome in response to high altitude dlvr.it/T599pb

Longitudinal multi-omics analysis uncovers the altered landscape of gut microbiota and plasma metabolome in response to high altitude dlvr.it/T599pb
Jatin Nagpal (@jatinnagpal87) 's Twitter Profile Photo

Gut microbiome predicts cognitive function and depressive symptoms in late life | Molecular Psychiatry idp.nature.com/authorize?resp…

Leo Lahti (@antagomir) 's Twitter Profile Photo

Editorial: "A concept for international societally relevant microbiology education and microbiology knowledge promulgation in society" …icro-journals.onlinelibrary.wiley.com/doi/full/10.11…

Katie Guzzetta 🌻 (@ktguzz) 's Twitter Profile Photo

"Towards a Health-Associated Core Keystone (HACK) index for the human #GutMicrobiome" - New #preprint from the Tarini Shankar Ghosh lab, ranking the 196 major gut microbes for associations w health & stability, and interrogates their functional characteristics! biorxiv.org/content/10.110…

Nature Reviews Microbiology (@naturerevmicro) 's Twitter Profile Photo

Co‐evolution of early Earth environments and microbial life rdcu.be/dJyZI In this Review, Lyons, Tino & colleagues explore the evolution of microbial life, focusing on early metabolic pathways and their role in Earth's changing environments over billions of years.

Co‐evolution of early Earth environments and microbial life

rdcu.be/dJyZI

In this Review, Lyons, Tino &amp; colleagues explore the evolution of microbial life, focusing on early metabolic pathways and their role in Earth's changing environments over billions of years.
Microbiome Virtual International Forum (@microbiomevif) 's Twitter Profile Photo

Don't miss #MVIF special event happening next week! Panel discussion w/ Kathryn Patras Katy Patras Marina Walther-Antonio Linda Brubaker Linda Brubaker Nichole Klatt Ian Fields @eeyanmille & invited talk by Monica R. Ticlla Ccenhua Monica Ticlla Register✍️events.ringcentral.com/events/microbi…

Don't miss #MVIF special event happening next week!

Panel discussion w/
Kathryn Patras <a href="/Katy_Patras/">Katy Patras</a>
Marina Walther-Antonio
Linda Brubaker <a href="/brubaker1030/">Linda Brubaker</a>
Nichole Klatt
Ian Fields @eeyanmille

&amp; invited talk by
Monica R. Ticlla Ccenhua <a href="/mticllacc/">Monica Ticlla</a>

Register✍️events.ringcentral.com/events/microbi…
Joachim Schork (@joachimschork) 's Twitter Profile Photo

I've recently discovered a really useful R package by Jan Broder Engler called tidyheatmaps. Full guide: jbengler.github.io/tidyheatmaps/ #DataAnalytics #database #RStats #Rpackage #statisticsclass #DataScience

I've recently discovered a really useful R package by Jan Broder Engler called tidyheatmaps.

Full guide: jbengler.github.io/tidyheatmaps/

#DataAnalytics #database #RStats #Rpackage #statisticsclass #DataScience
Joachim Schork (@joachimschork) 's Twitter Profile Photo

When building regression models, watch out for significant predictors! 🚨 Sometimes, variables that seem important might lose their significance when the model gets better. Webinar on Data Analysis & Visualization in R: statisticsglobe.com/webinar-data-a… #RStats #DataScience

When building regression models, watch out for significant predictors! 🚨 Sometimes, variables that seem important might lose their significance when the model gets better.

Webinar on Data Analysis &amp; Visualization in R: statisticsglobe.com/webinar-data-a…

#RStats #DataScience