🔥The 9th Round of Easy Loan, Earn $40 Reward is in progress❗️ ⏰ Promotion Period: January 15th - Feburary 15th, 2025 👉 Register now and check more details at gate.io/campaigns/358

I am so excited that the paper led by Wout Bittremieux (@[email protected]) on the creation of an open resource with nearest neighbor molecular network ms/ms library is out. rdcu.be/dt7ci when one does not get a match against existing libraries-this may help.

This paper is addressing a key challenge wrt the analysis of microbiome metabolomics data and that is - if a microbe can produce a molecule and which microbes can produce them? Tread 1/n

Call to the microbiome community. We are building a collaborative microbial metabolite center (CMMC) knowledgbase resource to allow direct connection of microbiome derived molecules, their producers and activities. If you have published papers and want to add your 1/

1/ 5 papers all computational biologists should read: 1. A Quick Guide to Organizing Computational Biology Projects buff.ly/2YiLMTc

It’s super exciting to see this paper online. This really shows the power of MassQL in large-scale compound discovery.

Tailored Mass Spectral Data Exploration Using the SpecXplore Interactive Dashboard #AC pubs.acs.org/doi/10.1021/ac…

So honored to be part of this great project led by Chen from Chao's lab. Chao Jiang Check and try it out! Generalized reporter score-based enrichment analysis for omics data academic.oup.com/bib/article/25…

There is currently not a single bile acid detection protocol that can fully capture the true diversity of bile acids, and, as a result, the ability to comprehensively detect and describe the extensive bile acid metabolic network represents a 21st century analytical challenge!!!

The lab made it to the top on our monthly lab outing with Knight Lab

Happy to see plantMASST out (biorxiv.org/content/10.110…). It is a community-curated database of nearly 20,000 LC-MS/MS data files from ~2,800 plant species, making them searchable. This allows one to directly connect plant's metabolites to their taxonomic distribution [1/4]

mzmine protocol just came out! Download the latest mzmine 4, jump into the wizard, and try it on your own #MS data! Special thanks to my best coding pal SteffenHeu and to tito_damiani, Tomáš Pluskal et al. for the amazing co-working xp on this article. nature.com/articles/s4159…

Thanks! 😊

Ten Simple Rules for Making Good Oral Presentations (1/2)

I'm thrilled to join Harvard Chan Environmental Health as Asst Prof of Environmental Health & Exposomics in Nov 2024! Deeply grateful to Pitt for 2.5 incredible years of growth and collaboration. Seeking talented postdocs to join our team in applying exposomics at population and cellular levels!

Ever wondered if there was a knowledgebase made for the characterization of microbial metabolites? That’s us! CMMC enables the shared use of data collected on these microbes by allowing streamlined deposition, sharing analysis tools, training, and more! cmmc.gnps2.org

Here’s all the JUICE on Uros…

To register use docs.google.com/forms/d/e/1FAI…

Happy new year to all! We are back again with TWO featured metabolites. Check it out at cmmc.gnps2.org/molecule_month/

We are back again with the April Molecule of the month featuring Colibactin! Check out more at cmmc.gnps2.org

I will be presenting our new insights into imaging MS data annotation. Welcome to join and discuss! linkedin.com/posts/theodore…