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Interested in the ecological dynamics of Enterobacteriaceae across populations? Check out our new study 🧬

OUT NOW - Ecological dynamics of Enterobacteriaceae in the human gut microbiome across global populations nature.com/articles/s4156…

New! 🔎An in-depth analysis of 12,000 metagenomes looking at Enterobacteriaceae interactions in healthy humans led by Alexandre Almeida from Medical Research Council Cambridge University Cambridge Vet School

Honoured to have made a (tiny) contribution to our *first* work as collaborators. Here’s to many more 🥂🚀

New #MicrobiomeDigest is OUT microbiomedigest.com/2025/01/16/jan… • Enterobacteriaceae in the human gut /Alexandre Almeida • microGalaxy /Bérénice Batut • bacterial vaginosis /mike • invitation for the next week Microbiome Virtual International Forum and more. Happy 2025!

An in-depth analysis of 12,000 metagenomes looks at Enterobacteriaceae interactions in healthy humans These findings from Alexandre Almeida et al. highlight the critical role of the intestinal milieu in the colonization success of opportunistic pathogens: loom.ly/r0R1QVw

If you have experience in sc/spatial transcriptomics with an interest in microbes....come and join our team as a computational postdoc: sanger.wd103.myworkdayjobs.com/WellcomeSang... Incredibly exciting datasets on host-microbe interactions in the lung. Pls RT and reach out if you are interested

Any microbiologist out here who has been using Chatbots for their bioinformatics/computational needs? I want to know more about their experience. Please RT for visibility! 🙂

I have been teaching classes on the gut #microbiome for almost 20 years and always struggled to have a good book to recommend. Finally there is one. Fergus Shanahan's "Fast Facts: The Gut Microbiome" provides expert insight, is brilliant, and it is free. doi.org/10.1159/isbn.9…

CoverM is published! CoverM: Read alignment statistics for metagenomics academic.oup.com/bioinformatics…

Proud to see our Cambridge Vet School researchers collaborating on this major initiative to explore how gut health shapes brain function and overall wellbeing. 🧠👇🏽

A new UK research network supported by UKRI will investigate how gut health impacts the brain, immune system, and mental wellbeing. Dr Alexandre Almeida (Alexandre Almeida) is part of the interdisciplinary team leading this new initiative. Read more: bio.cam.ac.uk/news/cambridge…

Excited to share some key findings from our latest research in Nature Microbiology reporting intra-cellular accumulation of #PFAS (aka forever chemicals) by certain human gut bacteria. nature.com/articles/s4156…

The GIBA network will be launching on September 22nd with an in-person event in Southampton. Do come along to hear and share your thoughts on our plans to drive innovation in the gut-immune-brain axis field in the UK. Sign-up here: eventbrite.com/e/uk-giba-netw…