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BioRxiv preprint on selective sequencing with Oxford Nanopore sequencers. biorxiv.org/content/10.110…. #phdchat #AcademicChatter

Very happy to share our work on selective sequencing use the Oxford Nanopore MinION. Code is here: github.com/LooseLab/readf… and the paper is here: nature.com/articles/s4158…

So - our ReadFish paper came out on Monday nature.com/articles/s4158… using GPU - but what if you only have a laptop? Here's an update from alex to our tools that enable ReadFish on Mac, Linux or Windows with no additional GPU or compute. looselab.github.io/2020/12/02/rea… for details.

If you haven't already, check out this super cool paper from alex and team, describing their new adaptive sampling toolkit Readfish — for enriching targeted panels in human genomic and metagenomic samples: bit.ly/2VVnr0F

DNA SEQUENCING: Complex targeted sequencing in real time go.nature.com/3rSXVbe #ResearchHighlight

Barcode aware adaptive sampling for Oxford Nanopore sequencers. biorxiv.org/cgi/content/sh… #bioRxiv

We've put out a short preprint today showing some updates in Readfish for Oxford Nanopore adaptive sampling. biorxiv.org/content/10.110… alex is giving a talk shortly at the #nanoporeconf about this - but a short thread here.