Anne Kupczok (@annecmg) 's Twitter Profile
Anne Kupczok

@annecmg

@[email protected] - Comparative Microbial Genomics, Phage genomics, Evolution

ID: 1083607434

linkhttps://annecmg.github.io/ calendar_today12-01-2013 17:33:17

1,1K Tweet

637 Followers

723 Following

BioSB (@biosb_nl) 's Twitter Profile Photo

❗ AI IN BIOLOGY HotTopics Symposium, 27 March 12:30, O2 building VU, Amsterdam. Registration open till 18 March, so 🔔 BE QUICK 🔔 More info and registration dtls.nl/biosb/hottopic…

Proteomics (@proteomics) 's Twitter Profile Photo

T'was great organizing the 'Deciphering Microbiome Functions' Workshop at Lorentz Center in Leiden with Magnus Palmblad, Lucia Grenga, Tim Van Den Bossche Alfredo Blakeley-Ruiz @j_henderickx. Had a great time meeting #microbiome researchers, attending brainstorming sessions last week. #DecMicFun

T'was great organizing the 'Deciphering Microbiome Functions' Workshop at <a href="/lorentzcenter/">Lorentz Center</a> in Leiden with <a href="/MagnusPalmblad/">Magnus Palmblad</a>, <a href="/lucillabis/">Lucia Grenga</a>, <a href="/tvdbossche/">Tim Van Den Bossche</a> <a href="/BlakeleyRuiz/">Alfredo Blakeley-Ruiz</a> @j_henderickx. Had a great time meeting #microbiome researchers, attending brainstorming sessions last week. #DecMicFun
CBGP (@cbgp_madrid) 's Twitter Profile Photo

#SeminarCBGP | 16/04/24 - 10:00h 👩🏽‍🔬 Anne Kupczok 🌍 Wageningen U&R, The Netherlands 📝 "Detection and genome reconstruction of RNA viruses in plant and insect sequencing data - approaches for virus ecology and evolution" 💻 Zoom ID: 889 4281 0589 | Código de acceso: 655098 #somosUPM

#SeminarCBGP | 16/04/24 - 10:00h

👩🏽‍🔬 <a href="/annecmg/">Anne Kupczok</a>
🌍 <a href="/WUR/">Wageningen U&R</a>, The Netherlands
📝 "Detection and genome reconstruction of RNA viruses in plant and insect sequencing data - approaches for virus ecology and evolution"
💻 Zoom ID: 889 4281 0589 | Código de acceso: 655098

#somosUPM
European Virus Bioinformatics Center (@evirusbioinfc) 's Twitter Profile Photo

Excited to announce that #ViBioM2024 will be live streamed! Free access for all non-industry professionals. Registration deadline: 24 May 2024 Don't miss out on this exclusive opportunity to join us virtually. #Livestream evbc.uni-jena.de/events/vibiom2…

Excited to announce that #ViBioM2024 will be live streamed! 
Free access for all non-industry professionals. Registration deadline: 24 May 2024
Don't miss out on this exclusive opportunity to join us virtually. 

#Livestream 

evbc.uni-jena.de/events/vibiom2…
Zamin Iqbal (@zaminiqbal) 's Twitter Profile Photo

Interesting new rool from Franz Baumdicker and colleagues. This is the last time phylogenetic effects interfere with your co-occurrence calculations.

Anne Kupczok (@annecmg) 's Twitter Profile Photo

Check out our new method to infer gene co-occurrences and avoidances in bacterial pangenomes biorxiv.org/content/10.110… github.com/fbaumdicker/go… with Franz Baumdicker

Check out our new method to infer gene co-occurrences and avoidances in bacterial pangenomes biorxiv.org/content/10.110… github.com/fbaumdicker/go… with <a href="/fbaumdicker/">Franz Baumdicker</a>
Rafal Mostowy (@rafalmostowy) 's Twitter Profile Photo

🧬 Excited to share our latest preprint: we introduce MANIAC, a new tool to rapidly estimate genetic relationship between viral genomes! 🧪🔬 biorxiv.org/content/10.110…

🧬 Excited to share our latest preprint: we introduce MANIAC, a new tool to rapidly estimate genetic relationship between viral genomes! 🧪🔬
biorxiv.org/content/10.110…
Katy Brown (@thekatybrown1) 's Twitter Profile Photo

Does anyone have any tips for teaching large group practicals using the web versions of BLAST, CLUSTAL, HHPred? Last week with 200+ students everything was failing - CLUSTAL showing no output, BLAST taking 45+ mins, HHpred locked for too many queries.

Nikos Vakirlis (@vakirlis) 's Twitter Profile Photo

SAVE THE DATE: 4-6 Nov 2024 An affordable EMBO lecture course for PhDs and Postdocs wishing to learn from and network with leading experts in Evolutionary and Comparative Genomics. Where? In stunning Nafplion! Please RT!

SAVE THE DATE: 4-6 Nov 2024
 
An affordable EMBO lecture course for PhDs and Postdocs wishing to learn from and network with leading experts in Evolutionary and Comparative Genomics.
Where? In stunning Nafplion!
Please RT!
Daniel Probst @skepteis@skepteis.social (@skepteis) 's Twitter Profile Photo

Some news on my side 🎉 I will join Wageningen U&R as an assistant professor in September. My research remains at the intersection of bioinformatics and cheminformatics and I will focus on applications contributing to pharmacology and sustainability in (bio)chemical synthesis and ag.

Kyle Mason-Jones (@kylemojo) 's Twitter Profile Photo

We’re hiring! PhD on rhizosphere phages and response to future atmosphere with metagenomics and isotopes… this project has it all 😉including awesome collaborators Anne Kupczok Linglingshi. And a great uni in beautiful Tü! #phdjobs #soil #phage uni-tuebingen.de/en/266340

We’re hiring! PhD on rhizosphere phages and response to future atmosphere with metagenomics and isotopes… this project has it all 😉including awesome collaborators <a href="/annecmg/">Anne Kupczok</a> <a href="/Linglingshi2022/">Linglingshi</a>. And a great uni in beautiful Tü! #phdjobs #soil #phage uni-tuebingen.de/en/266340
Nikos Vakirlis (@vakirlis) 's Twitter Profile Photo

Registration for our EMBO course in gorgeous Nafplion, Greece is open! With an excellent lineup of speakers and really affordable fees, this is a great deal for PhDs and postdocs. Please help spread the word! #EMBOEvoCompGenomics

Registration for our EMBO course in gorgeous Nafplion, Greece is open! With an excellent lineup of speakers and really affordable fees, this is a great deal for PhDs and postdocs. Please help spread the word! #EMBOEvoCompGenomics
Nikos Vakirlis (@vakirlis) 's Twitter Profile Photo

Job offer📢 I am recruiting a Master's-level bioscientist (computational/experimental) to work on the evolution of antimicrobial peptides in animals. Also looking for newly-minted PhDs and early career postdocs to apply for various postdoctoral fellowships. Please share!

Job offer📢 

I am recruiting a Master's-level bioscientist (computational/experimental) to work on the evolution of antimicrobial peptides in animals. Also looking for newly-minted PhDs and early career postdocs to apply for various postdoctoral fellowships.
Please share!
Nikos Vakirlis (@vakirlis) 's Twitter Profile Photo

New paper alert wt Anne Kupczok : we found thousands of species-specific genes in the human gut microbiome (some with evid. of selection) and they mostly seem to be "grown locally" in bacteria, rather than transferred from phages. genome.cshlp.org/content/early/…

Anne Kupczok (@annecmg) 's Twitter Profile Photo

PhD position at Wageningen University supervised by me and @hiljedoekes. You will combine bioinformatics and modelling to untangle the drivers of phage diversity across space and time wur.nl/en/vacancy/phd… #PhDposition #phage #bioinformatics #modelling

Anne Kupczok (@annecmg) 's Twitter Profile Photo

Call for postdoc proposals at Wageningen University wur.nl/en/jobs/your-d… Is your research interest in bioinformatics, evolution, and microbial and virus genomics and you see fit in our group (annecmg.github.io and wur.eu/BIF), then get in contact!

Michael Hiller (@hillermich) 's Twitter Profile Photo

#JobAlert. PhD and Postdoc positions in comparative #genomics. Join our #ERC synergy project #BATPROTECT to uncover the mechanisms behind bats' long healthspan & disease resistance. More info tinyurl.com/mwf2tr5c *Please RT.* #ResearchOpportunity #ScienceJobs LOEWE Centre Translational Biodiversity Genomics

Marina Khachaturyan (@zyukeriya) 's Twitter Profile Photo

Now PhD is officially over! Check out our new publication showing how different can be the path from mutation emergence to fixation/loss for mitochondria and plastids. Thank you Tal Dagan @MarineEvolEcol Mario Santer!! #eelgrass #heteroplasmy #organelles academic.oup.com/mbe/article/41…

Now PhD is officially over! Check out our new publication showing how different can be the path from mutation emergence to fixation/loss for mitochondria and plastids. Thank you <a href="/DaganLab/">Tal Dagan</a> @MarineEvolEcol <a href="/MarioSanter/">Mario Santer</a>!! #eelgrass #heteroplasmy #organelles academic.oup.com/mbe/article/41…