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Hi! We are SciLifeLab 's BioImage Informatics Unit. We tweet about #BioImageAnalysis in general, highlighting Swedish activities.

We have opened two positions for Bioinformaticians with focus on research support in image analysis in our two sites - Uppsala and Stockholm Solna, Sweden. Uppsala: scilifelab.se/career/bioinfo… Stockholm Solna: kth.se/en/om/work-at-…

If you are interested in bioimage informatics do not miss this opportunity! My lab has had amazing help from BIIF setting up an AI-based image analysis solution for our human LNs. There will be lots of interesting projects to dive into...

We in BIIF_Sweden are part of Euro-BioImaging ERIC. So if you want get help by us with #bioimageanalysis, you can apply via the Access Fund - Deadline December 15!

Very happy about all the work done by the TissUUmaps team! 💪 TissUUmaps 3: Interactive visualization and quality assessment of large-scale spatial omics data shorturl.at/dBQV1 You can visit the website to access TIssUUmaps 3 learn more about it: tissuumaps.github.io

New video: an introduction to QuPath with focus on multiplexed fluorescence microscopy data. It starts from the beginning - creating a project - and covers cell detection + classification, and ends with the detection of blood vessels and spatial analysis. youtu.be/WTAgXpuuqNY

Upcoming TissUUmaps webinar, March 1st 9 a.m.! TissUUmaps is a browser-based tool for GPU-accelerated visualization and interactive exploration of millions of datapoints overlaying tissue samples, developed in coll. with Carolina Wählby lab. Register here: docs.google.com/forms/d/e/1FAI…

Our TissUUmaps webinar is now online! Learn how to install TissUUmaps 3.0, load images, markers and regions, play with visualization settings, use plugins, load / save / share TissUUmaps projects, and more: youtube.com/watch?v=W41SGT…

We (BIIF_Sweden) are hiring! #BioImageAnalysis position - permanent - in Uppsala, Sweden. Join us to work with researchers all over Sweden in their bioimage analysis projects. Closing date: October 21, 2022. forum.image.sc/t/bioinformati…

We ( BIIF_Sweden ) are hiring! #BioImageAnalysis position - permanent - in Uppsala, Sweden. Join us to work with researchers all over Sweden in their bioimage analysis projects. Closing date: October 21, 2022. uu.varbi.com/en/what:job/jo…

Our HEV-finder highlighted in the beautiful presentation of Matthew Hartley EMBL-EBI on the BioImage Archive🤩. Get more info here: ebi.ac.uk/biostudies/Bio…

Exciting news! TissUUmaps 3.1 is now available! 🎉 1/9 - In this thread, I highlight some of the main new features: AnnData / HDF5 support, side by side display, network visualization, and many more! Download now: tissuumaps.github.io #TissUUmaps #SpatialOmics #Visualization

We are holding a #TissUUmaps webinar next Tuesday, 10:00 am CET. #TissUUmaps is a tool for GPU-accelerated interactive quality assessment and #visualization of large-scale #SpatialOmics and digital pathology data. Register here: scilifelab.se/event/tissuuma…

The recordings our last #TissUUmaps webinar are now available on YouTube! youtube.com/watch?v=r9YMQ5…

Bioimage analysis has become a keystone of biological research! Join this advanced #EMBOBioImage course that concentrates on teaching cutting-edge concepts and tools for quantitative #imageanalysis 💻🔬 📩Register by 18 June 📍EMBL Heidelberg 🌐s.embl.org/bia23-01

Interested in processing your #multiplexed imaging data? Don't miss our #steinbock #webinar by Jonas Windhager this Friday, 9am! scilifelab.se/event/steinboc…