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Today we’re excited to freely share an early-version of, perhaps, the world’s most expansive genetics dataset: Logan. #bioinformatics #petabase #genetics #genomics #openscience biorxiv.org/content/10.110…

At a recent conference Athena Aktipis invited me to give a talk on the role of creativity in science. For those interested here are the illustrated slides in tweetorial format. The take home message: Creativity and science go hand in hand. (Thread 1 of 2)

biorxiv.org/content/10.110… "Interestingly, this work consistently highlights that the neuroactive potential of gut microbiota in the elderly with cognitive complaints varies between men and women..

How an Irish study of zebrafish can help us to understand human stress and anxiety | ⁦⁦Irish Independent⁩ I spoke with Lorna Siggins⁩ about the recently funded ⁦⁦@scienceirel⁩ ⁦We are now Research Ireland⁩ Pathway grant. independent.ie/irish-news/hea…

3) Yet in my past 25 years as a computational biologist I have repeatedly seen some of the best, most technically gifted and intellectually deep, bench biologists treat computationally differently. Any computational result that supports a claim they wish to make is sufficient ->

Excited to share BakRep - our latest work published in Microbiology Society #MGen >661,000 bacterial genomes, uniformly characterized & annotated, enriched with metadata, accessible via a flexible search engine doi.org/10.1099/mgen.0… 👇 1/7

The informal poll results are in, & as I feared, most people are running ANOVAs in #R with functions that can give highly misleading (or flat out wrong) results. Follow along to see why using anova() and aov() is usually inadvisable & why you should be using car::Anova() 🧵

🚨 New Research Excited to share my PhD work now published in Cell Metabolism In this study we explore the role of the gut microbiota in regulating the complex interaction between stress and circadian rhythm link: tinyurl.com/bdd98e6a Follow the 🧵 for the key findings

Preprint from our lab in BiorXiv already available, revealing that effects of exercise 🏃🏻‍♀️on brain 🧠 display hormetic profile (improved cognition & neurogenesis when moderate, useless when strenuous) caused by microbiota 🦠signature 🧬changes CSIC Divulga SENC Instituto Cajal-Centro de Neurociencias Cajal-CSIC

Yeah. Not good. sciencedirect.com/science/articl…

Another step for microbiome research!🔬 New study introduces saMBA, a gut microbiome archive from South America. Understanding the full picture of gut microbiome biodiversity is crucial & saMBA is helping us get there! John F. Cryan Benjamin Valderrama biorxiv.org/content/10.110…