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Busy week last week. Forgot to let you all know that VisPy 0.9.0 was released with new plane clipping functionality, new thinner + marker (++), and various bug fixes. Full announcement can be found on the mailing list: groups.google.com/g/vispy/c/O5t3…

🚀Please take part in our 2nd annual napari user survey! This feedback is critical ensuring napari services the needs of the community and adjusts strategy accordingly. You can complete the 8 min survey here: chanzuck.co1.qualtrics.com/jfe/form/SV_6Q… please share with all napari using friends!

Very excited about this one! With Kevin Yamauchi and Alister Burt's work on 3D interactivity a whole new bunch of doors opened :)

I hope to try my hand at making some tutorial videos and/or teach a webinar for VisPy. Help me decide what I should do by taking this survey: forms.gle/8fMuw2jeucMp3E…

VisPy 0.10.0 is out now! It includes fixes and updates to the VolumeVisual, a new ComplexImageVisual, and contributions from 4 new contributors! Full announcement: groups.google.com/g/vispy/c/5hTI…

BIG thanks to the napari community, and especially to today's session presenters Lorenzo Gaifas Marcelo Zoccoler Tom Burke Brian Northan @EntraCod Alister Burt Kevin Yamauchi and Draga Doncila Pop. It was amazing 🤩

Successfully defended my PhD yesterday - what a relief! A huge thank you to IrinaG for your supervision and to the jury Daniel Castaño Díez Mikhail Eltsov Beeby lab Isabelle Arnal and Winfried Weissenhorn for a fantastic discussion and making a zoom defence feel truly special 🤓

Tired of running model2point to work with IMOD model files in Python? 😴 Me too - here's imodmodel, a small package for reading .mod files, I hope it's useful to somebody! github.com/teamtomo/imodm…

I've been getting a bunch of questions about working between Warp, Dynamo and RELION 4.0 for subtomogram averaging so I wrote an outline of a workflow over at forum.image.sc/t/working-betw…

Lorenzo Gaifas and I are presenting a poster this afternoon at #EuroSciPy2022 on the napari viewer and plugin ecosystem (featuring the amazing napari-clusters-plotter plugin by Laura Žigutytė et al.: napari-hub.org/plugins/napari…). Say hello if you're around!

I had a great time at #tomo2020! Finally met a bunch of cool #teamtomo folk in person, and now I have about a million new things to try out on my data.

Since there was some interest at #tomo2020: I made a simple napari plugin to quickly interpolate N-dimensional label across a single dimension: github.com/brisvag/napari…. So you can stuff like you did in Amira, but with FOSS ;)

live weighted backprojection demo in napari 🙂

A bit 😴 after an amazing week in the bay area for a CZI Science workshop on the computational frontiers of cryo-ET Here are my slides on napari🔬 for #teamtomo Original @ Google slides: bit.ly/3EaicRJ Zenodo archive: zenodo.org/record/7300237

Joanna TIMMINS and Irina Gutsche from Institut de Biologie Structurale present collaborative work on cell division of radioresistant Deinococcus radiodurans 🦠, including PhD work of Lorenzo Gaifas funded by GRAL (Structural & Cell Biology in Grenoble)

FYI my twitter account was compromised. I'm back in, but if in the last few days weird things happened, that's why.