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Today was my last lecture for Massachusetts Institute of Technology (MIT) #ComputationalBiology: #Genomes, #Networks, #Evolution, #Health. I recorded each and immediately posted online here: youtube.com/playlist?list=… Please do share, and let me know which topics need more explanations, clarifications, and corrections!

The moment we stopped watching Bridgerton Let us explain ... Things were going great and we were really getting into Season 3. That is until we watched this scene unfold before our eyes ....

What would you do with 1000+ spatial transcriptomics samples with corresponding H&E-stained whole-slide images? Meet HEST-1k, a collection of 1,108 ST samples assembled from 131 public and internal cohorts encompassing 25 organs, 2 species. HEST-1k includes over 1.5 million

Super happy to announce that two days ago I successfully defended my doctoral thesis! Thank you to my supervisors for their support Bruno Paiva María José Calasanz , and the thesis committee for a great discussion. Really enjoyed the day ☺️

🚨New paper alert🚨 in Blood Cancer Journal rdcu.be/dNj0q Interest in immune response to infection and vaccines started during #COVID19 and pivoted to a new research line in our lab! Thanks #Espe Esteban Tamariz Amador Camila Guerrero Paula Rodriguez-Otero Clínica Universidad de Navarra Cima Universidad de Navarra #mmsm

1/ Even in the era of single-cell RNAseq, bulk-RNAseq data are still very valuable. 10 tools/papers related to bulk-RNAseq deconvolution.🧵

Data visualization is a balancing act between art and science. The science is in the data - the accuracy, the analysis, the methods. The art is in the presentation - the design, the storytelling, the creativity.

Con el apoyo de Contra el Cáncer Investigación e Iberdrola, la Dra. Esperanza Martín y el grupo del Dr. Bruno Paiva (Cancer Center Clínica Universidad de Navarra) han descrito por qué vacunas como la de la COVID-19 tienen menor eficacia en pacientes de mieloma múltiple. #investigandoencáncer. ➡️contraelcancer.es/es/investigaci…

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I'm teaching a new course! AI Python for Beginners is a series of four short courses that teach anyone to code, regardless of current technical skill. We are offering these courses free for a limited time. Generative AI is transforming coding. This course teaches coding in a way

A systematic overview of single-cell transcriptomics databases, their use cases, and limitations frontiersin.org/journals/bioin…

Google has a new experimental tool (Illuminate) that takes a link to a preprint and creates a "podcast" discussing the paper. I tested this with a few preprints that recently caught my attention (Ropebwt3, genomic language models, VEP guidelines) blog.stephenturner.us/p/illuminate-p…

📢New paper alert📢 Published in Journal of Clinical Oncology, it brings hope of MRD assessment in the blood of myeloma patients using NGF and mass spec, which we called peripheral residual disease = PRD #mmsm Carmen González Díaz-Cano Noemi Puig PETHEMA Clínica Universidad de Navarra Cima Universidad de Navarra ascopubs.org/doi/pdf/10.120…

Do you know/have/are high-school students interested in #AI for #DataScience? We've developed a 5-session course with The Robo Hub for 5 Saturdays from Oct 19-Nov 16, covering (1) data science, (2) predictive modeling, (3) AI agents, (4) data scraping, and (5) the integration of

There's a new nf-core pipeline 1.0.0 release today: 𝗻𝗳-𝗰𝗼𝗿𝗲/𝘀𝗰𝗻𝗮𝗻𝗼𝘀𝗲𝗾 is a bioinformatics best-practice analysis pipeline for 10X Genomics single-cell/nuclei RNA-seq data derived from Oxford Nanopore Q20+ chemistry nf-co.re/scnanoseq/1.0.… github.com/nf-core/scnano…

What happens when patients with myeloma and sustained MRD negativity choose to discontinue maintenance? We sought to answer this question in our study MRD2STOP, out now in Blood Cancer Journal nature.com/articles/s4140…

#mRNAvaccines for #PancreaticCancer (PDAC) PART4 1. Out today in nature nature.com/articles/s4158… 🧵👇🏽 [1/23]

Excited to share our #multiomics study of who was the world's #oldest living person! Our research on this record-breaking #supercentenarian suggests that, under certain conditions, #aging and #disease can become decoupled—challenging the common belief that they are inherently

🚨Did you know that nearly half of myeloma patients have clonal hematopoiesis during treatment? Find this and more in our new paper Blood Cancer Discovery Congrats Camila Guerrero Catarina Maia María José Calasanz CIMA LAB Diagnostics Clínica Universidad de Navarra Cima Universidad de Navarra PETHEMA! #mmsm aacrjournals.org/bloodcancerdis…

Fascinating #MMsm article in Blood Cancer Discovery : congrats Bruno Paiva Camila Guerrero et al! CH ⬆️ with time in myeloma but not associated with ⬇️PFS or ⬆️OS. Interestingly, ⬆️ BMPC% increases CH risk 3x. Good reassurance for when we find CH as part of workup for cytopenias!