CATMAID (@catmaid) 's Twitter Profile
CATMAID

@catmaid

A Collaborative Annotation Toolkit for Massive Amounts of Image Data

ID: 705401010328637441

linkhttp://www.catmaid.org calendar_today03-03-2016 14:34:41

49 Tweet

439 Followers

5 Following

HHMI | Janelia (@hhmijanelia) 's Twitter Profile Photo

Janelia scientists have imaged a complete adult fruit fly brain at nanoscale resolution, offering a new tool for researchers and uncovering new surprises. bit.ly/2Nt1i3K

Davi Bock (@dddavi) 's Twitter Profile Photo

And, a preview of what the whole fly brain EM dataset's user community has been up to while we rewrote, etc. ~5 mm traced cable length shown here! beautiful visualization by Uni Matrix, somewhat mangled by my downsizing & trimming to only 180° rotation #ASAPbio #bioRxiv

Greg Jefferis (@gsxej) 's Twitter Profile Photo

As Zhihao Zheng points out in response below, you absolutely can explore this awesome whole fly brain EM dataset from Davi Bock and crew online in CATMAID thanks to work of Virtual Fly Brain (shout out to Rob Court The University of Edinburgh) & image data hosted in Cambridge @MRC_LMB.

Florian Jug (@florianjug) 's Twitter Profile Photo

1 day left to register for #I2K Teaser: Neuronal circuit mapping & analysis with CATMAID -- circuit graphs, Venn diagrams of synaptic partners, 3D morphology visualizations, arbor synapse distrib., etc. This and more from my father, Albert Cardona @[email protected], at embl.de/training/event…

1 day left to register for #I2K

Teaser: Neuronal circuit mapping &amp; analysis with <a href="/catmaid/">CATMAID</a> -- circuit graphs,  Venn diagrams of synaptic partners, 3D morphology visualizations, arbor synapse distrib., etc.

This and more from my father, <a href="/albertcardona/">Albert Cardona @albertcardona@mathstodon.xyz</a>, at embl.de/training/event…
Greg Jefferis (@gsxej) 's Twitter Profile Photo

Excited to share our bioRxiv: #connectomics reconstruction of olfactory circuits in the #Drosophila brain led by Alexander Bates @MRC_LMB, Uni Matrix Marta Costa Dept of Zoology. Collaboration with @ddavi, Scott Waddell, Gerry Rubin HHMI | Janelia 1/12 biorxiv.org/content/10.110…

Excited to share our <a href="/biorxivpreprint/">bioRxiv</a>: #connectomics reconstruction of olfactory circuits in the #Drosophila brain led by <a href="/as_bates/">Alexander Bates</a> @MRC_LMB, <a href="/uni_matrix/">Uni Matrix</a> <a href="/martamcosta2/">Marta Costa</a> <a href="/CamZoology/">Dept of Zoology</a>. Collaboration with @ddavi, <a href="/ScottishWaddell/">Scott Waddell</a>, Gerry Rubin <a href="/HHMIJanelia/">HHMI | Janelia</a>  1/12 biorxiv.org/content/10.110…
CATMAID (@catmaid) 's Twitter Profile Photo

Congratulations on these new publications---an amazing collaborative effort! Including many nice reconstructions of neurons and their connectivity, created in the FAFB CATMAID instance (manual + segmentation). Soon to be shared through Virtual Fly Brain. #drosophila #connectomics

Michael Winding (@windingmichael) 's Twitter Profile Photo

Check out our new preprint: the complete #connectome of the entire #Drosophila larval brain, with all inputs and all outputs, and a comprehensive analysis of feedforward and feedback pathways across both brain hemispheres #Neuroscience biorxiv.org/content/10.110…

Check out our new preprint: the complete #connectome of the entire #Drosophila larval brain, with all inputs and all outputs, and a comprehensive analysis of feedforward and feedback pathways across both brain hemispheres #Neuroscience biorxiv.org/content/10.110…
Zlatic Lab (@zlaticlab) 's Twitter Profile Photo

šŸ‘‹ It is out! Our joint effort to create a complete synaptic connectome of Drosophila larval brain came true and is published in Science Magazine: science.org/doi/10.1126/sc… Amazing work by Michael Winding, Ben Pedigo + colleagues from @MRC_LMB Cambridge University Johns Hopkins Engineering Johns Hopkins BME

Michael Winding (@windingmichael) 's Twitter Profile Photo

We’ve generated a synapse-resolution map of an insect brain, includes 3016 neurons and half a million synaptic sites! Out today in Science science.org/doi/10.1126/sc… Summary below and in Ben Pedigo’s thread. Zlatic Lab, Albert Cardona @[email protected], NeuroData Lab, Carey Priebe, and many others