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Benchmarking integration of single-cell differential expression buff.ly/3NVvyFs

CellPhoneDB V5 😱: arxiv.org/abs/2311.04567

Happy to share almost 3 years of work with my first paper (first co-author too!) out of my PhD! We present a spatially resolved single cell atlas of fatal COVID-19 in an African setting. Massive thank you to all authors involved and Chris Moxon and Thomas D. Otto for all the support

Applications for this year's University of Glasgow Bioinformatics summer school are now open!! If you want to know more about the wonderful world of genomics and transcriptomics, then come join us for a bumper one/two week odyssey. gla.ac.uk/schools/infect…

What makes a good cell embedding🧬? Is a higher score always better? Not quite! In this new preprint with @Jure & #Aviv, we ... [1/3] biorxiv.org/content/10.110…

How to pick a problem. Today in Cell. 1/53 cell.com/cell/fulltext/…

📢📢REMINDER: Applications are open for our annual Glasgow Bioinformatics Summer School ’24! Interested in learning bioinformatics or don’t know where to start? Sign up to our comprehensive coding bootcamp! Deadline is the 01/07/2024: gla.ac.uk/schools/infect… #singlecell #bioinfo

I've written the first part of a chapter on the heritability of IQ scores. Focusing on what IQ is attempting to measure. I highlight multiple paradoxical findings demonstrating IQ is not just "one innate thing". gusevlab.org/projects/hsq/#… I'll summarize the key points here. 🧵

My model for writing abstracts is used for practically every empirical article I write. It is based on studying a lot of highly-cited articles!

I like this colorblind friendly palette in particular:

Well done Joy!!🎉🎉🎉

Thanks so much!! Really thankful for all the support from our lab member Olympia Hardy Dom Somma Ross Laidlaw and friends come by to listen 🥰🥰 And big congrats to Lavinia Lavinia Coletto !! such an amazing poster!

🚨New paper alert! Check out our new preprint led by the fabulous team below 👇🏽👇🏽 Was happy to be a part of it! #singlecell #spatial #newpaper #arthritis

Awwww finally!!!

It was a great opportunity to chair our discussion panel ‘Is spatial worth the hype?’ and the verdict is YES but only if you have a refined research question to make the most of this wonderful technique! Thank you to my wonderful panel #spatial #singlecell #cbc24

First day in #cbc24 It’s great to see so many interesting talk, and big congrats to Andrew’s impressive flash talk and Olympia’s spatial panel discussion^^

Congrats Ross!!!

If you have time, have a look at this little paper: rdcu.be/d0T5P #COVIDー19 #scRNA, IMC data from Malawi. Long project, great collaboration - and the data are here: cellatlas.mvls.gla.ac.uk Have a look at the data integration :-)

Congratulations Olympia!!!🎉🎉🎉🎉🎉🎉🎉🎉🎉🎉🎉🎉🎉🎉🎉🎉🎉🎉🎉🎉🎉🎉🎉🎉🎉🎉🎉🎉🎉🎉🎉🎉🎉🎉🎉🎉🎉🎉🎉🎉🎉🎉🎉

Excited to share our atlas build&use guide, out Nature Methods today. Led by Karin Hrovatin & Lisa Sikkema w Malte Luecken, our review highlights best practices for building, sharing, and leveraging atlases to unlock new biological discoveries. 🌍Human Cell Atlas nature.com/articles/s4159…