Christoph Ziegenhain (@chris_zie) 's Twitter Profile
Christoph Ziegenhain

@chris_zie

Ass. Prof at @karolinskainst, loving all things single cell and genomics!

ID: 2684813714

calendar_today27-07-2014 11:09:26

784 Tweet

1,1K Followers

810 Following

Enard/Hellmann Lab (@enardhellmannwg) 's Twitter Profile Photo

We are happy to share our latest work on #ambientRNA in single-cell and single-nucleus RNA-seq experiments, out now in Genome Biology! (1/7) link.springer.com/article/10.118…

Jan Lause 🟦 @janlause.bsky.social🦉 (@janlause) 's Twitter Profile Photo

How would you model #scRNA read count data w/o UMIs? We say: Use our compound NB-model, get a fast, theory-based normalization for free - Compound Pearson residuals! New preprint with Dmitry Kobak Christoph Ziegenhain Leonard Hartmanis @CellTypist: biorxiv.org/content/10.110… See 🧵for details!

How would you model #scRNA read count data w/o UMIs?

We say: Use our compound NB-model, get a fast, theory-based normalization for free - Compound Pearson residuals!

New preprint with <a href="/hippopedoid/">Dmitry Kobak</a> <a href="/chris_zie/">Christoph Ziegenhain</a> <a href="/LHartmanis/">Leonard Hartmanis</a> @CellTypist:
biorxiv.org/content/10.110…

See 🧵for details!
Christoph Ziegenhain (@chris_zie) 's Twitter Profile Photo

I’m hiring ! Are you a computational scientist looking for a postdoc position? Come join us at Karolinska Institutet to dive into fun projects on alternative splicing and a super nice collaboration with Jens Hjerling Leffler ⭐️⭐️🇺🇦⬜️🟥⬜️ lab ki.varbi.com/en/what:job/jo… please RT!

Ines Hellmann (@ihellmann) 's Twitter Profile Photo

Finally, we completed the story and are proud to share it with the world. Evidence for compensatory evolution within pleiotropic regulatory elements biorxiv.org/content/10.110…

Christoph Ziegenhain (@chris_zie) 's Twitter Profile Photo

🎉 Exciting news! Our department is seeking a new junior faculty member. Join us and kickstart your career with a generous startup grant, just like Bjørt Katrinardóttir Kragesteen Florian Rosenberger and I did! Apply now and join MBB Karolinska Institutet

Elisa Granato (@prokaryota) 's Twitter Profile Photo

Final stretch for this microbiology #Kickstarter! We are telling the forgotten story of Fanny Angelina Hesse & agar with a graphic novel: kickstarter.com/projects/jens-… If you'd like to back this project, the deadline is Sat 20th July at 12 PM CEST! 🧫👩‍🔬

Natalie Papanicolaou (@nataliepapanic) 's Twitter Profile Photo

Excited to share a pre-print of our latest work on the multi-layered dosage compensation of the avian Z chromosome. A big thank you to @Antle718 Björn Reinius, all of the co-authors for their contributions and the Reinius lab for all their support! biorxiv.org/content/10.110…

Björn Reinius (@breinius) 's Twitter Profile Photo

Excited to have published our work on #SEQURNA, a next-generation RNase inhibitor transforming #scRNAseq & other applications. ➡️Introducing synthetic thermostable RNase inhibitors to single-cell RNA-seq 🚀 🌕 nature.com/articles/s4146… 🧵…

Christoph Ziegenhain (@chris_zie) 's Twitter Profile Photo

Read Elisa Granato's new follow-up blog (mini paper) on what postdocs spend their time on as their career goes on! Spoiler alert: Academics work in weird ways.. elisagranato.com/days-in-the-li…