Dan Kozome (@d_zome) 's Twitter Profile
Dan Kozome

@d_zome

Ph.D. student at OIST. Interested in Protein Engineering and Evolution. 週1🏈 沖縄11年目

ID: 1285347500

linkhttps://researchmap.jp/Dan_Kozome calendar_today21-03-2013 07:37:31

1,1K Tweet

324 Followers

1,1K Following

Yuta Yamazaki (@yutayamazaki5) 's Twitter Profile Photo

I'm happy to share my work in the Membranology unit OIST_KonoLab at OIST OIST. We resolved the temporal coordination of plasma membrane (PM) repair events by comprehensively identifying PM repair proteins.

YOshiki (@y0shiki_2019) 's Twitter Profile Photo

Happy to share my first paper published in Nucleic Acids Res! doi.org/10.1093/nar/gk… I have developed a highly stable, expressed and active methyltransferase called SUPREM (SUPer Rna Ecogii Methyltransferase) by ASR. Many thanks to Paola Laurino, Ben, and TerenzioLab !

Mathias Girbig (@mathiasgirbig) 's Twitter Profile Photo

Excited to share my first paper as a postdoc with Georg Hochberg Max Planck Institute for Terrestrial Microbiology! We've made some fascinating discoveries about the evolution of animal stem cells in colab with Ralf Jauch and Alex de Mendoza. 🧬🔬 Link: nature.com/articles/s4146… (1/n)

Georg Hochberg (@kahochberg) 's Twitter Profile Photo

New paper from the lab: rdcu.be/d2g28. You may remember the strange fractal assemblies we discovered in citrate synthase. Well, the reason we even found that protein is that we were interested in how conserved self-assembly is in an enzyme with a very basic function.

Colin Jackson (@jackson_lab) 's Twitter Profile Photo

The emergence of order from disorder, the dependence on initial conditions (evolutionary contingency), the fractal geometry of phylogenetic trees, epistasis, etc., are all attributes that protein evolution shares in common with other "complex" systems. arxiv.org/abs/2412.06115

Nozomu Yachie (@nzmyachie) 's Twitter Profile Photo

Please circulate! Chan Zuckerberg Initiative and STELLAR SCIENCE FOUNDATION (SS-F) have started the Global Science Scholars program to exchange postdocs between the US and Japan. yachielab in Osaka University is one of the host labs in Japan side. czbiohub.org/program-ssfcz-…

fajie yuan (@duguyuan) 's Twitter Profile Photo

We release our protein chatGPT, Evola! 🌟 chat-protein.com Evola comes in two versions: 10B & 80B. The 80B model has a 1.3B Saprot encoder & a 70B LLaMA3 decoder. Trained on 546 protein question-text pairs with an 150 billion word tokens! 💡🔬 biorxiv.org/content/10.110…

We release our protein chatGPT, Evola! 🌟 chat-protein.com

Evola comes in two versions: 10B & 80B. The 80B model has a 1.3B Saprot encoder & a 70B LLaMA3 decoder.

Trained on 546 protein question-text pairs with an 150 billion word tokens! 💡🔬

biorxiv.org/content/10.110…
Nature Chemical Biology (@nchembio) 's Twitter Profile Photo

A new paper from Claudia Höbartner and Universität Würzburg #UniWürzburg reports the crystal structures of the ribozyme SAMURI, revealing the mechanism of its methyltransferase activity and site-selectivity nature.com/articles/s4158…

Yusuke Nasu (@nasulab_ibc) 's Twitter Profile Photo

国際インターンシッププログラムのお知らせ(日本の学部生・院生の方へ) #タンパク質工学 を用いた #バイオセンサー 開発に興味のある方, IBC Academia Sinicaに立ち上がった新しいラボで1〜3ヶ月の #インターンシップ に参加しませんか?詳細と申し込みはこちら:iipp.tw/program

Adrian Bunzel 🇪🇺🇨🇭🇩🇪🏳️‍🌈 (@adrianbunzel) 's Twitter Profile Photo

🚨Preprint Alert!🚨 #ProteinDesign is advancing rapidly—wouldn't it be great to seamlessly combine design tools to achieve more than what each can do alone?🤔 Here, we introduce AI.zymes: A modular platform for evolutionary #EnzymeDesign.♻️🖥️ biorxiv.org/content/10.110… 1/🧵

🚨Preprint Alert!🚨

#ProteinDesign is advancing rapidly—wouldn't it be great to seamlessly combine design tools to achieve more than what each can do alone?🤔

Here, we introduce AI.zymes: A modular platform for evolutionary #EnzymeDesign.♻️🖥️

biorxiv.org/content/10.110…
1/🧵
Liam M. Longo (@liamlongo) 's Twitter Profile Photo

Redefining the Limits of Functional Continuity in the Early Evolution of P-Loop NTPases Now out in Molecular Biology and Evolution Exciting collaboration with Caroline Lynn Kamerlin 🇺🇸🇬🇧🇸🇪🇮🇷 ☀️ 🇪🇺🦓 academic.oup.com/mbe/advance-ar…

田中知成研究室 / T. Tanaka Group (@ttanaka_lab_kit) 's Twitter Profile Photo

腸内細菌由来の糖質加水分解酵素によるグリコシル化反応の論文が、Chem. Asian. J.誌に受理されました🎉 大沼研(近大農)との共同研究です🦠 Our latest paper, enzymatic glycosylation catalyzed by GH84 GlcNAcase, is out now in Chem. Asian. J.🎊 aces.onlinelibrary.wiley.com/doi/10.1002/as…

matsuura_tomoaki (@tomo_matsuurag) 's Twitter Profile Photo

Happy to share our recent results led by Fukunaga san, a former lab member, now has his own group since Jan 2025 at Miyazaki. Novel and orthogonal riboswitches that can be used in the cell-free system were developed. educ.titech.ac.jp/bio/news/2025_…

矢守 航 / Wataru Yamori (@utokyo_yamori) 's Twitter Profile Photo

💫日本学術振興会インタビュー掲載🥰 特別研究員-DC1、海外特別研究員、特別研究員-PD、そして、JSTさきがけ研究員(兼任)としての研究生活についてお話ししています😀 これまで支えてくださった皆さまへの感謝を込めて、ご紹介させていただきます☘️ ⬇️インタビュー記事⬇️ jsps.go.jp/file/storage/j…

Fidel Ramírez (@fidelormz) 's Twitter Profile Photo

I'm truly excited to announce our new publication in nature unraveling a central picture of the Methyl-coenzyme M reductase (MCR) activation machinery and it's strong ATP dependency - kudos to Anuj Kumar for the fantastic illustration! LINK: nature.com/articles/s4158…

I'm truly excited to announce our new publication in <a href="/Nature/">nature</a> unraveling a central picture of the Methyl-coenzyme M reductase (MCR) activation machinery and it's strong ATP dependency - kudos to <a href="/AnujR2d2/">Anuj Kumar</a> for the fantastic illustration!

LINK: nature.com/articles/s4158…
bioRxiv Biophysics (@biorxiv_biophys) 's Twitter Profile Photo

Functional and Structural Characterization of F1-ATPase with common ancestral core domains in stator ring biorxiv.org/content/10.110… #biorxiv_biophys

OIST (@oistedu) 's Twitter Profile Photo

Congratulations to Professor Paola Laurino and the Protein Engineering and Evolution Unit at OIST for winning the 2025 #FrontiersPlanetPrize National Championship for Japan, for their work on SAR11 - the ocean’s most abundant microbes!🏆 Paola Laurino oist.jp/news-center/ne…

Ryota IINO 飯野亮太 (@ryotaiino) 's Twitter Profile Photo

落合佳樹さん(OIST)にセミナーをして頂きます。 日時:2025年8月22日(金) 15:00-16:00 場所:山手3号館2階共通セミナー室 講演者:落合佳樹 (Yoshiki Ochiai) 所属:沖縄科学技術大学院大学(OIST) 題目:DNA/RNA標識ツールの開発を目指した非配列特異的DNA/RNAメチルトランスフェラーゼの探索と改変

落合佳樹さん(OIST)にセミナーをして頂きます。

日時:2025年8月22日(金) 15:00-16:00
場所:山手3号館2階共通セミナー室
講演者:落合佳樹 (Yoshiki Ochiai)
所属:沖縄科学技術大学院大学(OIST)
題目:DNA/RNA標識ツールの開発を目指した非配列特異的DNA/RNAメチルトランスフェラーゼの探索と改変