
Daniel Segrè
@dsegre
Between physics and biology - Metabolism, microbial ecosystems, origin of life
ID: 28939108
http://segrelab.bu.edu 05-04-2009 04:19:08
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From #16S_rRNA data to #microbiome co-occurrence #networks: how does the choice of algorithms and parameters affect the final outcome? Paper by Dileep Kishore and collabs out at EIC Jack Gilbert tinyurl.com/micone16S


Do you love microbes, marine sediments, & biogeochemistry? Then come work with us. Daniel Segrè & I are looking to co-mentor a postdoc as part of the BU Microbiome Initiative initiative. More here: fulweilerlab.com ASLO Coastal & Estuarine Research Federation (CERF) Chemical Currencies of a Microbial Planet (C-CoMP) Black in Marine Science @BlackInMicro

estuaries + sediment + fluxes + microbes = joy! Check out this postdoc position: tinyurl.com/5fmr78b2 Daniel Segrè BU Microbiome Initiative ASLO Black in Marine Science Coastal & Estuarine Research Federation (CERF) ISME - International Society for Microbial Ecology Woods Hole Oceanographic Institution (WHOI) Marine Biological Laboratory (MBL)

Post-doc alert! Interested in microbiology, metabolism and modeling? Want to explore how microbial interactions reduce mortality in the most abundant phytoplankton on Earth? Join our team... tinyurl.com/5n7sw5nu Haim Treves Daniel Segrè segrelab_news Please RT


Congratulations to Prof. Yonina Eldar of Department of Computer Science and Applied Mathematics and Prof. Tzachi Pilpel of the Department of Molecular Genetics for being awarded the #LandauPrize for Sciences and Arts awarded by Mifal HaPais



Our paper is out Nature Communications on integrating retina & #GTEx e/sQTLs and single-nucleus RNA-seq from 10 eye tissues CZI Science with GWAS of #glaucoma & eye pressure to uncover disease mechanisms: shorturl.at/twxFS Mass Eye and Ear @HMSEye Broad Institute NEI 1/6



Excited to share our latest research on early metabolic evolution, recently published in NatureEcoEvo! 🧵👇 nature.com/articles/s4155… #ScienceTwitter #ResearchHighlight (1/12)

Our latest publication lead by Valeria Lipsman is out 🎉 revealing a fascinating collaboration between bacteria and algae! 🌊🧫 We've uncovered how bacteria contribute a polysaccharide to an algal-bacterial shared matrix, promoting aggregation! 🧶🔬 nature.com/articles/s4152…

What happens when integer programming meets the #microbiome? Multi-Attribute Subset Selection (MASS). Joint work with the Daniel Segrè group at Boston University and my former student Taiyao Wang in Nature's Communications Biology nature.com/articles/s4200…

Multi-Attribute Subset Selection is an algorithm to identify the most descriptive growth conditions in microbial phenotyping experiments. This streamlines high-throughput phenotyping efforts and helps to reveal biological insights: nature.com/articles/s4200… segrelab_news, Yannis Paschalidis

1/n Can LLMs perform scientific research? And, can they do so while enhancing key scientific values including transparency, traceability & verifiability? Check out our preprint on the "data-to-paper" platform. w the amazing Tal Ifargan Lukas Hafner arxiv.org/abs/2404.17605


Article on a phenomenon we refer to as the divergence-complexity effect in #MicrobialCommunities, by Michael Silverstein – collaboration between the labs of Jenny Bhatnagar (she/her) & Daniel Segrè – out at NatureEcoEvo. nature.com/articles/s4155…. What is the idea? 1/2

Our new paper reveals a remarkable ability in marine bacteria: they extract methyl groups from algal metabolites, creating a metabolic shortcut that accelerates the shift from lag phase to growth. Expertly led by @MartinSperfeld and Delia Narváez nature.com/articles/s4156…

Microbial metabolism operates at the level of pathways, cells, ecosystems. Some quantitative principles hold at multiple scales and may help connect them. Many fun conversations with Daniel Sher (Daniel Sher) and Mick Follows, condensed in a new perspective: nature.com/articles/s4156…
