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Great talk by Rayan Chikhi on efficient indexing of k-mer presence and abundance!

Checkmate, Chromosome 8: The First End-to-End Sequence of a Human Autosome. Congrats to Glennis Logsdon & the #T2T team on this amazing work! ow.ly/C6xx50Bx40T #HiFiReads

Today is #WorldCancerResearchDay and we can't think of a better way to celebrate it than to share this picture of TFRI-funded researchers coming together to honour Terry's legacy. We want the world to know how committed we are to finding new cures for cancer...TOGETHER.

Thanks @msfhr. I like my surprise gift box!

I am looking forward to an exciting talk by our invited speaker Zamin Iqbal at VanBUG seminar this Wed. vanbug.org/2020/zamin-iqb…

Our paper on annotation-free detection and discovery of alternative splicing has been accepted to @recomb2020! Congrats to our PhD student @baraaorabi and Vancouver Prostate Centre and thanks to NSERC / CRSNG and @msfhr for funding! 📰: biorxiv.org/content/10.110… 💾: github.com/vpc-ccg/freddi…

The paper deadline for RECOMB-Seq 2021 is coming up on March 22! Check out the website for more information. recomb2021.org/recomb-seq-sat…

Very proud of the latest work from our lab were we aimed to understand why there are vastly more androgen receptor binding sites (ARBS) than AR-regulated genes. We functional tested all common clinical binding sites and found.....genomebiology.biomedcentral.com/articles/10.11…👇1/n

BISER extends our earlier SD-detection tool, SEDEF, to multiple genomes and will be presented in WABI 2021. Thanks to @msfhr and NSERC / CRSNG for support :) BISER: github.com/0xTCG/biser SEDEF: github.com/vpc-ccg/sedef

I'll also be talking about mdBG in this year's RECOMB on Tuesday, August 31 at 3PM. Happening virtually, and free! x.com/recomb21/statu…

RECOMB-Seq now has an official YouTube channel! Most talks from 2020 and 2021 are now available here: youtube.com/channel/UCYdQZ…

📢ANNOUNCEMENT: The 2021 Scholar & Research Trainee awardees are advancing science and contributing to world-class #health #research in BC to ultimately improve the health of British Columbians. Meet the 86 recipients: bit.ly/3nmkcyn #MSFHRCommunity

Read our latest research published by Springer Nature's BMC on gene fusion detection using long-reads. Our latest tool, Genion, is developed by our PhD student fatih karaoglanoglu 📜: bmcgenomics.biomedcentral.com/articles/10.11… 💻: github.com/vpc-ccg/genion 🐍: anaconda.org/bioconda/genion

If you are at RECOMBseq, make sure to attend our grad student podium presentation by Ghazal Ebrahimi on scTagger: 📜: biorxiv.org/content/10.110… 💿: github.com/vpc-ccg/scTagg…

Our latest manuscript by Ghazal Ebrahimi and @baraaorabi is now published by iScience journal! "Fast and accurate matching of cellular barcodes across short-reads and long-reads of single-cell RNA-seq experiments" 💾: github.com/vpc-ccg/scTagg… 📃: sciencedirect.com/science/articl…

Call For Papers is out, key dates announced: Paper submission: Oct 7, 2022 Notification: Nov 20, 2022 Final versions due: Jan 8, 2023 More at recomb2023.bilkent.edu.tr/keydates_and_d… and recomb2023.bilkent.edu.tr/call_for_paper…

Our work on Freddie, an annotation-indepented isoform discovery using long-reads tool, is finally published at Nucleic Acids Res! Check the open access code and paper: 📄: academic.oup.com/nar/advance-ar… 💾: github.com/vpc-ccg/freddi… 🐍: conda install -c bioconda freddie