FAIRtracks (@fairtracks) 's Twitter Profile
FAIRtracks

@fairtracks

Mobilising the wealth of genome sequence-mapped data through consolidated #FAIR metadata and connected services. Towards an RDA working group as #RDATIGER pilot

ID: 1361672260126445572

linkhttps://fairtracks.net calendar_today16-02-2021 13:43:18

92 Tweet

56 Followers

158 Following

Ari Asmi (@asmi_ari) 's Twitter Profile Photo

Full room of #eosc projects in the coordination meeting. I am presenting the RDA Europe #rdatiger services 🐯 for potential users (prey?🐅). Trying to convince projects to open to outside of their immediate internal development toward global collab. Remove blinkers for a sec!

Full room of #eosc projects in the coordination meeting. I am presenting the <a href="/RDA_Europe/">RDA Europe</a> #rdatiger services 🐯 for potential users (prey?🐅).

Trying to convince projects to open to outside of their immediate internal development toward global collab. Remove blinkers for a sec!
UCSC Genome Browser (@genomebrowser) 's Twitter Profile Photo

We are happy to announce the release of the Highly Reproducible genomic regions for sequencing for the human (GRCh38/hg38) genome assembly, which is part of the Problematic Regions supertrack. Learn more about this release from the following news post: genome.ucsc.edu/goldenPath/new…

GA4GH (@ga4gh) 's Twitter Profile Photo

It's official: #refget v2.0 is the next GA4GH standard. bit.ly/3XTm4z1 This API for reliably finding the right reference sequence powers all #CRAM files. v2.0 users include GA4GH VRS, European Nucleotide Archive (ENA), and soon Ensembl. Thanks to EMBL-EBI's Timothee Cezard & Andy Yates and the team!

It's official: #refget v2.0 is the next GA4GH standard. bit.ly/3XTm4z1
This API for reliably finding the right reference sequence powers all #CRAM files. v2.0 users include GA4GH VRS, <a href="/ENASequence/">European Nucleotide Archive (ENA)</a>, and soon <a href="/ensembl/">Ensembl</a>.
Thanks to <a href="/emblebi/">EMBL-EBI</a>'s <a href="/tcezard/">Timothee Cezard</a> &amp; <a href="/enscore/">Andy Yates</a> and the team!
Andy Yates (@enscore) 's Twitter Profile Photo

This has been a long road since our PR was opened 4th March 2020. I am immensely proud of the work that's gone into refget from its origins in the CRAM Reference Registry to now as a foundational standard in genomics. Thank you to all who have contributed

Australian BioCommons (@ausbiocommons) 's Twitter Profile Photo

Come to booth 27 at #ICG2023 to hear about the resources we have available such as Galaxy Australia, Australian Reference Genome Atlas (ARGA), Apollo and Fgenesh++ services, and our #bioinformatics training program - including recordings of all our webinars on youtube! biocommons.org.au/services

FAIRtracks (@fairtracks) 's Twitter Profile Photo

We’re at the International Congress of Genetics and Genomics in Melbourne! If you are interested in helping us bring about uniform search for genome annotations, or tracks, please come over for a chat. I will be presenting poster #224 tomorrow 12-14. #ICG2023

We’re at the International Congress of Genetics and Genomics in Melbourne! If you are interested in helping us bring about uniform search for genome annotations, or tracks, please come over for a chat. I will be presenting poster #224 tomorrow 12-14. #ICG2023
UCSC Genome Browser (@genomebrowser) 's Twitter Profile Photo

We are happy to announce the addition of a new assembly hub, Sunflower Sea Star, to the Public Hubs page. Browse through this assembly hub today: tinyurl.com/5dzastu9 Revive & Restore MichaelNDawson Lauren Schiebelhut Melissa DeBiasse @katharina_hoff

AQUA-FAANG (@aqua_faang) 's Twitter Profile Photo

🧬👩‍🔬Registration for the EuroFAANG Ontology Improvement Workshops is open: cutt.ly/5wfjVqIx 🔬 EMBL-EBI will be hosting 2 virtual workshops🖥️ on utilising the new Ontology Improvement Tool within the FAANG Data Portal. 👀More information: cutt.ly/KwfjVc57

🧬👩‍🔬Registration for the <a href="/EuroFaang/">EuroFAANG</a> Ontology Improvement Workshops is open: cutt.ly/5wfjVqIx

🔬 <a href="/emblebi/">EMBL-EBI</a> will be hosting 2 virtual workshops🖥️ on utilising the new Ontology Improvement Tool within the FAANG Data Portal.

👀More information: cutt.ly/KwfjVc57
Ensembl (@ensembl) 's Twitter Profile Photo

#Ensembl is excited to be part of the @BGAcademy23 🌍 🧬 🐏 🦅 🪲 🪸 José G. Pérez-Silva will be showing participants how genomes are annotated the ✨Ensembl-way✨ 👨🏻‍💻 More info on the #BGA23 website: buff.ly/43tnn8X

#Ensembl is excited to be part of the @BGAcademy23 🌍 🧬 🐏 🦅 🪲 🪸
<a href="/jgperezsilva/">José G. Pérez-Silva</a> will be showing participants how genomes are annotated the ✨Ensembl-way✨ 👨🏻‍💻

More info on the #BGA23 website: buff.ly/43tnn8X
Research Data Alliance (RDA) (@resdatall) 's Twitter Profile Photo

Next week! De-mystifying the Research Data Alliance: Learn what it is, how it works and how to get involved. 🗓️22 August 2023 🕙10:00 - 11:00 UTC Introducing newcomers to RDA and the particular benefits for the Irish community. More info and register: tinyurl.com/3jra5an9

Next week!

De-mystifying the Research Data Alliance: Learn what it is, how it works and how to get involved.

🗓️22 August 2023
🕙10:00 - 11:00 UTC

Introducing newcomers to RDA and the particular benefits for the Irish community.

More info and register: tinyurl.com/3jra5an9
Galaxy Project (@galaxyproject) 's Twitter Profile Photo

We are excited to share a new paper in preprint that shares the latest #genome assembly pipeline used by the Vertebrate Genome Project in Galaxy! This new pipeline is freely #accessible through Galaxy and can be run in just a few clicks! Read here: tinyurl.com/2p97ejr3

We are excited to share a new paper in preprint that shares the latest #genome assembly pipeline used by the Vertebrate Genome Project in Galaxy! This new pipeline is freely #accessible through Galaxy and can be run in just a few clicks!
Read here: tinyurl.com/2p97ejr3
FAIRtracks (@fairtracks) 's Twitter Profile Photo

In particular, check out the birds-of-a-feather session “FAIRification of Genomic Tracks” of the #RDAplenary: rd-alliance.org/fairification-… More info will come soon!

FAIRtracks (@fairtracks) 's Twitter Profile Photo

Eivind also took the initiative for the FAIRtracks project (+The Genomic HyperBrowser statistical analysis framework, back in 2005 or so)! Congratulations!🎂🥳 Btw: please register to the #2 kickoff for our new #rda working group, Sept 25, UTC 2-3:30pm: tinyurl.com/rda-fair-tracks

FAIRtracks (@fairtracks) 's Twitter Profile Photo

Thank you Ryan and the others in #RDATIGER for your ongoing facilitation of the "FAIRification of Genomic Annotations" working group initiative: tinyurl.com/rda-fair-tracks

RDA Europe (@rda_europe) 's Twitter Profile Photo

As the #InternationalDataWeek2023 approaches, what can you learn? What are the community benefits? Hear about it first hand from our Research Data Alliance (RDA)/@EOSCFuture Domain Ambassadors in this video filmed at #RDAPlenary 20 youtube.com/watch?v=uMp4oy…

UCSC Genome Browser (@genomebrowser) 's Twitter Profile Photo

We are proud to announce a new hg38 track group consisting of Human Pangenome Reference Consortium data. In this first release, there are tracks displaying features and variations of HPRC results compared to hg38, as well as alignment tracks. See the full announcement: bit.ly/HPRCdataInUCSC…

We are proud to announce a new hg38 track group consisting of <a href="/HumanPangenome/">Human Pangenome Reference Consortium</a> data. In this first release, there are tracks displaying features and variations of HPRC results compared to hg38, as well as alignment tracks.

See the full announcement: bit.ly/HPRCdataInUCSC…
UCSC Genome Browser (@genomebrowser) 's Twitter Profile Photo

We are excited to announce the new JASPAR 2024 tracks for hg19, hg38, mm10, and mm39 which represent genome-wide predicted binding sites for transcription factors with binding profiles in the JASPAR CORE collection (JASPAR database). Learn more at bit.ly/JASPAR2024