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New tool to explore cell identity in #singlecellsequencing against bulk sequencing data! enriri🐻⬇️🌵 Jarny Choi Kim-Anh Lê Cao 🦋@mixomics.org "Sincast: a computational framework to predict cell identities in single-cell transcriptomes using bulk atlases as references": academic.oup.com/bib/advance-ar…

I was lucky enough to be a part of this epic work in the Taoudi lab at WEHI (Walter and Eliza Hall Institute), which has finally been published: doi.org/10.1038/s41467…. A huge testament to Christine Biben and Samir Taoudi for their sheer determination and persistence over many years.

I talked to Nick only a month ago in Parkville. He was so happy about his recent move to CSL and his voice was full of optimism for the future. Deeply saddened. #notonlyabioinformatician

What to do during a Covid lockdown in Melbourne for nerds: rewrite a data portal from scratch. doi.org/10.1101/2023.0…. Stemformatics すぃ/Sui

A new statistical method developed by our PhD student Yidi Deng, in collaboration with Kim-Anh Lê Cao 🦋@mixomics.org. Designed to select stable/unstable features from omics data, with respect to a change in some environment (batch, disease, cell type, etc): doi.org/10.1101/2023.0…

Visualise RNA isoforms with IsoVis: doi.org/10.1093/nar/gk…. Work of 2 hard working masters students in the Mike Clark lab over several years.

Quite a detailed article on the history of publishing in science: theguardian.com/science/2017/j…