Judith Bernett (@judith_bernett) 's Twitter Profile
Judith Bernett

@judith_bernett

Bioinformatics PhD student at TUM

ID: 4185740135

calendar_today14-11-2015 10:44:48

26 Tweet

91 Followers

104 Following

Jan Baumbach (@janbaumbach) 's Twitter Profile Photo

CoVex went online. It's the first COVID-19 / SARS-CoV-2 drug repurposing prediction online tool using integrated systems and network medicine approaches. We report in our special blog until publication. It's online available here: exbio.wzw.tum.de/covex/

Jan Baumbach (@janbaumbach) 's Twitter Profile Photo

Our new video for non-specialists about Network and Systems Medicine for Drug Repurposing against #COVIDー19 #SARSCoV2 is online: youtube.com/watch?v=yK1rbF… Very proud, ExBio team! Thanks Julian Matschinske @julian_spaeth Mhaned Oubounyt

Melissa Klug (@meeklug) 's Twitter Profile Photo

And congratulations again Lisi Arend, Judith Bernett and Quirin Manz for developing the very nice tool CYANUS for differential expression analysis using CyTOF and FACS data! Check it out and use it for your own data!: exbio.wzw.tum.de/cyanus/. academic.oup.com/bib/advance-ar…

David B. Blumenthal (@dbblumenthal) 's Twitter Profile Photo

Network-based disease module mining tools often yield non-robust modules and are prone to random bias. To address this problem, we’ve designed a new method using enumeration of diverse Steiner trees: track.smtpsendmail.com/9032119/c?p=Jw… Jan Baumbach @KacprowskiTim Judith Bernett @itisalist

Judith Bernett (@judith_bernett) 's Twitter Profile Photo

Happy and excited to finally share this project! We show conclusively that high accuracies of deep learning-based PPI prediction models are exclusively due to data leakage via sequence similarities and node degree information. biorxiv.org/content/10.110… @itisalist David B. Blumenthal

Happy and excited to finally share this project!  
We show conclusively that high accuracies of deep learning-based PPI prediction models are exclusively due to data leakage via sequence similarities and node degree information.
biorxiv.org/content/10.110… @itisalist <a href="/dbblumenthal/">David B. Blumenthal</a>
Judith Bernett (@judith_bernett) 's Twitter Profile Photo

Very proud to present our latest work: 7 guiding questions to avoid data leakage in biological machine learning applications ✨🔍 We hope that reflecting on these questions helps researchers to identify issues or shortcuts leading to overly optimistic performance estimates. 📈🧑‍🔬