
Nils Mechtel
@nilsmechtel
PhD student at the AICell Lab, @scilifelab 🧬 | Exploring the intersection of AI and biology to advance whole-cell modeling 🦠💻
ID: 1766197390606831617
08-03-2024 20:21:52
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50 Followers
115 Following



.Wei OUYANG, Estibaliz Gómez de Mariscal, PhD and Nils Mechtel showcase BioEngine capabilities at the AI4Life workshop ai4life.eurobioimaging.eu/announcing-bio…


Nils Mechtel rocked at the AI4Life Team workshop in Madrid with live collaborative demos and stress-testing on the #BioEngine server 😅


🎥 We've interviewed Joanna Hård, CEO of Amun AI, a startup from KTH Royal Institute of Technology, who shares insights on their Hypha platform and the synergy with AI4Life: ai4life.eurobioimaging.eu/interview-amun…


.Caterina Fuster-Barceló (she/her) has written a report for FocalPlane describing the AI4Life workshop, hackathon & uploathon that took place in UC3M. Check it out! focalplane.biologists.com/2024/06/25/ai4…


Also in this month's issue: the BioImage.IO Chatbot is a community-driven platform leveraging GPT-4, retrieval augmented generation and advanced AI agents to help users navigate bioimaging tools, databases and services. Wei OUYANG


☀️ Looking for something cool to read this summer? Check out the BioImage.IO Chatbot 🤖 in our latest Nature Methods publication, designed to enhance #BioImageAnalysis: 🔗 nature.com/articles/s4159…


Nils Mechtel presented his work in modelling whole cells using #AI, the challenges on managing massive datasets and new data generation #AI4LifeSRM AI4Life Team


Nils Mechtel from SciLifeLab KTH Royal Institute of Technology includes in his talk a live demo of AI4Life's new collaborative annotation tool, BioImage.IO Colab. Try it out: bioimage-io.github.io/bioimageio-col…


The very fantastic AI4Life Team pre-Single Molecule Localization Microscopy Symposium workshop🔥finished with tones of highlights on #tracking #diffussion_stimation #pointcloudanalysis #standardisedAI and of course, the unsolved bi-loved actinµtubules😍 I can only say THANK YOU to all the participants!🙏😎


Check out our perspective article on AI-powered Virtual Cells. This is a result of an exciting collaboration with Stephen Quake Jure Leskovec Aviv Regev, Bougatsa Charlotte Bunne Yusuf Roohani @yanayrosen Chan Zuckerberg Initiative and extensive community discussions. arxiv.org/pdf/2409.11654


Waiting for pizza!! #I2K2024 Iván Hidalgo Cenalmor Bruno Saraiva Inês Cunha @biovoxxel Stephane Rigaud Estibaliz Gómez de Mariscal, PhD Virginie Uhlmann + others!


Excited to be at #I2K2024 as a first-year PhD student! 🚀 Check out my poster (board #24) where I’ll present our human-in-the-loop image annotation framework with #microSAM. Plus, don’t miss the workshop on the #AI4Life BioEngine with Estibaliz Gómez de Mariscal, PhD! See you there! 👀 #AI

Want to learn how to use microSAM for annotating your data and missed our live workshop at #i2k ? You can join for the I2K virtual seminar on Monday where Anwai Archit will present our tool again: tinyurl.com/Virtual-I2K202…

If you didn't play with the #bioengine on your phone today, you can still reach Nils Mechtel tomorrow at #I2K2024! 🖌️📱🦠


#I2K2024 attendees, decision time again: 1⃣ Introduction to AI4Life and BioImage Model Zoo by ilastik Team and Anna Kreshuk's Lab 2⃣AI4Life: Empowering BioImaging through the BioEngine by Nils Mechtel Estibaliz Gómez de Mariscal, PhD Bonus challenge: spot the giraffe! 🦒 Hint: we came prepared… with T-SHIRTS! 👕


Oh yes!! Nils Mechtel got the challenge to explain and try the #BioEngine very successfully! We made computer scientists annotate data and still all alive! It's so cool to share these workshops with AI4Life Team members, no matter the distance🤩



😍⚠️And it’s out in J Cell Science!! Our review on the opportunities and challenges of using Machine Learning in Microscopy research 🤖🔬! From using ML to curate data to using ML to give us more KNOWLEDGE about our data (i.e. Interpretation 😉) DOI: doi.org/10.1242/jcs.26… (1/n) ⬇️