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We have a fully funded PhD opportunity to start on Oct 2025 on "Harnessing Explainable AI to Identify Key Microbial Drivers of Reduced Ruminant Greenhouse Gas Emissions" funded by SUSTAIN (lnkd.in/eyYzTqp9) Closing date Sunday 27th October 2024! Please share.

A fishy tale about the the Salmon Microbial Genome Atlas is now out in Nature Microbiology. We hope this culture and genome biobank provides a functional resource to the community and supports the next generation of salmon gut microbiome projects. nature.com/articles/s4156…

Out today: BioNumPy is a Python package for efficient array programming on biological data. nature.com/articles/s4159…

Metabolic interplay drives population cycles in a cross-feeding microbial community biorxiv.org/cgi/content/sh… #biorxiv_sysbio

Check out this recent review featuring CMR’s A/Prof Luis Pedro Coelho (16-20 July @ London, UK), which highlights recent advancements and current challenges in the field of orthology-based research. Read the full article here: rb.gy/d532ez

A little late to the party, but I'm really excited to see this work out from Sarah Ardell, Alena Martsul, and Sergey Kryazhimskiy over at UCSD, with some help from me from afar. Sergey's thread goes over the main results. Here's why I think they are fun to think about:

biorxiv.org/content/10.110… Fantastic collaboration with Jarosz Lab , allowing us to give some answers why proteomes are so diverse

So, we are looking for a PhD student to join the MACE lab in Switzerland to work on Swiss Alp microbiomes. To apply: careers.epfl.ch/job/Sion-PhD-E…

Overjoyed for our software in Genome Biology on advancing reconstruction of species-representative metabolic models from metagenome-assembled genomes 🎉 Kudos to Nicola De Bernardini stefano campanaro Guido Zampieri johannes zimmermann Silvio Waschina 🧬 Department of Biology – University of Padova 10.1186/s13059-024-03425-1

We are seeking three PhD students within computational biology/bioinformatics at the Norwegian University of Life Sciences: Comparative evolutionary genomics: jobbnorge.no/en/available-j… Host-microbe interactions using genomics: jobbnorge.no/en/available-j… Deadlines: October 31st.