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Quoi, encore un nouvel outil? Grâce au billet rédigé par Pierre Poulain, chercheur en bio-informatique à l'Université Paris Cité et ambassadeur Software Heritage, vous découvrirez comment et pourquoi archiver dès maintenant votre code source: bioinfo-fr.net/software-herit…

At #SWH2025, thought leaders from science, technology, & policy explored the future of software and its impact on society, tackling the complex issues surrounding code’s pervasive influence. softwareheritage.org/2025/02/26/tak…

In 2024, sandbox.bio had >170,000 tutorial page views! 🥳 The most popular tutorials were: 1. ​Terminal basics 2. ​Genomic intervals with bedtools 3. ​Terminal exercises 4. ​Data exploration with awk 5. ​DNA sequencing QC Check them out here: sandbox.bio/tutorials

I'm teaching databases this semester at Berkeley. My students all seem unusually brilliant. Not many go to office hours, and not too many folks post on the course forum asking project questions. Weirdly, the exam had the lowest recorded average in my 10 semesters teaching it.

(I'm obviously biased since I sell Python/Data training for a living). If you really want to take advantage of AI, make sure you are an expert, and then you will know what work to give to it, be able to prompt it correctly and evaluate the results.

Pierre Poulain Franck Lebeau Ed Rushton it will be, working on an interactive blog post

I wrote a quick new post on "Digital Hygiene". Basically there are some no-brainer decisions you can make in your life to dramatically improve the privacy and security of your computing and this post goes over some of them. Blog post link in the reply, but copy pasting below

Blog post version on my new Bear ʕ•ᴥ•ʔ blog, with advanced features like outbound links karpathy.bearblog.dev/digital-hygien…

S'il vaut mieux être poli avec ChatGPT pour obtenir des réponses plus qualitatives, il ne faut pas se méprendre sur la capacité réelle de la machine à comprendre le langage qu'elle produit. C'est le thème de ce nouvel épisode de IA qu'à m'expliquer! letemps.ch/podcasts/ia-qu…

I just released a preprint reporting on my experiment with generative AI in my Engineering Computations course. TL;DR: It was a mess. The biggest issue? The "illusion of competence." #GenAI #education #edtech

The #SWHID, now an ISO Standard, is like a super-secure barcode for software: It uniquely identifies a specific version of a software artifact. softwareheritage.org/2025/05/14/iso…

New #AlphaFold materials now live! Earlier this year, with Google DeepMind, we held the AlphaFold Education Summit to increase capacity and enable more researchers to use the #AlphaFold system and database. View the free course materials: ebi.ac.uk/training/mater… EMBL-EBI

Researchers at iLM, Recherche and INST Mohali have introduced a novel class of theranostic nanoclusters, showcasing their ability to combine precise near-infrared (NIR) imaging with robust anti-tumor efficacy. advanced.onlinelibrary.wiley.com/doi/10.1002/ad…

Your code matters. To help ensure it's preserved for future use & study, we made it simple to contribute directly to the Software Heritage archive. Whether it's a public repo URL or research code, secure its place in history. Find out how: softwareheritage.org/2019/01/10/sav…

Par Pierre Poulain.bsky.social : "Partage et réutilisation des données de simulations de dynamique moléculaire : qu'avons-nous raté ? " #Bioinformatics #Data #Science #OpenData #OpenScience ça discute aussi modélisation moléculaire, métadonnées et IA ! videos.univ-grenoble-alpes.fr/video/31805-pa…

🚀 Introducing GLiNER-X: Breaking Language Barriers in Multilingual Zero-Shot NER! 🌍 We’re excited to roll out our latest update—GLiNER-X, now powered by the T5 model family, pre-trained on 101 languages and robust on long sequences. #NLP #NER #Multilingual

Wrote a more detailed blog about how/why here: koaning.io/posts/uvx-patt…

Another deep dive in the technology behind Conda package managers: file linking! Did you know that there are symlinks, hardlinks and reflinks? Reflinks are the best – copy on write is space efficient and isolates the cache. Learn more: prefix.dev/blog/what-link…

bioRxiv Zenodo Still waiting on better ORCID Organization integration to be a reality though: x.com/figgyjam/statu…