
Romain Guiet
@romainguiet
Biologist , Imaging & BioImageAnalyst @LeBIOP, @epflSV, openSource & 3Dprinting enthusiast @FablabFR, otherwise : science & graphicalArts passionate!
ID: 3431104984
19-08-2015 06:00:07
830 Tweet
649 Followers
343 Following

Have you tried #CellSeg3D yet for automating your 3D lightsheet microscopy analysis? We just hit >75K pip installations! 🥳 We have some 🔥 coming soon ... but in the meantime, github.com/AdaptiveMotorC… lead by Cyril Achard Neuro-X Institute

Happy to present Trackastra - a new transformer-based cell tracking method that aims to reduce manual parameter tuning in tracking experiments while yielding SOTA results on several datasets. Great work by Ben Gallusser EPFL Life Sciences arxiv.org/abs/2405.15700 github.com/weigertlab/tra…


Writing documentation can be time-consuming. Let #biabob help you 😉 New in version 0.15.1: Modify existing Project Jupyter notebooks, e.g. for introducing explanations between code cells 😃🎉 github.com/haesleinhuepf/…





American Society for Cell Biology members, join Meghan Driscoll and me to hear about experimental-computational collaborations! Following > 15 years of productively working together, Sandra Schmid and Danuser Lab will share with us their insights on what make collaborations succeed or fail ✨ 1/2





#ImageOfTheMonth This image was acquired by J.Angibaud Interdisciplinary Institute for Neuroscience 🧠. Neurons and astrocytes are cultured on a soft polyacrylamide hydrogel. Neurons are labeled for MAP-2 protein (blue), astrocytes for GFAP protein (red) and transfected neurons show GFP expression (green).



As we are moving more towards using OMERO at scale openmicroscopy, I found interacting with OMERO through #Python sometimes a bit tricky. So I started to write up some things I've learned along the way - biapol.github.io/omero-tools - maybe it's helpful for others, too 😃




🔬✨#LatsisSymposium, Day 2! Starting another exciting day of discussions around #imaging, automation, and #AI! 🙏 Huge thanks to our sponsors The Latsis Foundation, Roche, Teledyne Teledyne Photometrics, ZEISS Group, Viventis Microscopy (Part of Leica Microsystems) and @Leica_Micro for their support.


